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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7464873   growth-regulating factor 9 
 ppo-r.4   7464873   growth-regulating factor 9 
 ppo-m.4   7464873   growth-regulating factor 9 
 gma-u.5   100795050   growth-regulating factor 9 
 gma-u.5   100306494   QLQ and WRC domain-containing protein 
 mtr-u.5   11412908   growth-regulating factor 9 
 ath-u.5   GRF9   growth-regulating factor 9 
 vvi-u.5   100261588   growth-regulating factor 10 
 vvi-u.5   100242152   growth-regulating factor 3 
 sly-u.5   104649060   growth-regulating factor 9 
 osa-u.5   4343178   growth-regulating factor 11-like 
 osa-u.5   4330314   growth-regulating factor 10-like 
 zma-u.5   100101537   uncharacterized LOC100101537 
 zma-u.5   100101542   putative growth-regulating factor 1 
 zma-u.5   100286247   uncharacterized LOC100286247 

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Top 50 coexpressed genes to 7464873 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7464873 (ppo-u.5 coexpression data)

CoexMap"7464873"


ppoLOC7464873 | Entrez gene ID : 7464873    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 3 2 1 1 2 1 2 3 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006351 [list] [network] DNA-templated transcription  (264 genes)  IEA  
GO:0032502 [list] [network] developmental process  (406 genes)  IEA  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1948 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (3662 genes)  IEA  
GO MF
GO:0005524 [list] [network] ATP binding  (2559 genes)  IEA  
Protein XP_024440946.1 [sequence] [blastp]
XP_024440947.1 [sequence] [blastp]
XP_024440948.1 [sequence] [blastp]
XP_052302937.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for XP_024440946.1)
nucl 8,  cyto 1  (predict for XP_024440947.1)
nucl 9  (predict for XP_024440948.1)
nucl 9  (predict for XP_052302937.1)
Subcellular
localization
TargetP
other 8  (predict for XP_024440946.1)
other 8  (predict for XP_024440947.1)
other 8  (predict for XP_024440948.1)
other 8  (predict for XP_052302937.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7464873

.
ppo-r.4
for
7464873

.
ppo-m.4
for
7464873

.
gma-u.5
for
100795050

.
gma-u.5
for
100306494

.
mtr-u.5
for
11412908

.
ath-u.5
for
GRF9

.
vvi-u.5
for
100261588

.
vvi-u.5
for
100242152

.
sly-u.5
for
104649060

.
osa-u.5
for
4343178

.
osa-u.5
for
4330314

.
zma-u.5
for
100101537

.
zma-u.5
for
100101542

.
zma-u.5
for
100286247

.


Ortholog ID: 3443
Species ath gma gma sly osa zma zma bra vvi vvi mtr tae tae hvu hvu ghi ghi sbi sbi sot cit cit bdi nta nta
Symbol GRF9 LOC100306494 LOC100795050 LOC104649060 LOC4330314 LOC103627547 LOC100286247 LOC103866214 LOC100261588 LOC100242152 LOC11412908 LOC123052800 LOC123141646 LOC123426113 LOC123401933 LOC107924792 LOC107936377 LOC8076036 LOC8074212 LOC102601540 LOC102608091 LOC102619103 LOC100837152 LOC107795016 LOC107799231
Function* growth-regulating factor 9 QLQ and WRC domain-containing protein growth-regulating factor 9 growth-regulating factor 9 growth-regulating factor 10-like growth-regulating factor 10 uncharacterized LOC100286247 growth-regulating factor 9 growth-regulating factor 10 growth-regulating factor 3 growth-regulating factor 9 growth-regulating factor 11 growth-regulating factor 10 growth-regulating factor 11-like growth-regulating factor 10-like growth-regulating factor 9 growth-regulating factor 10 growth-regulating factor 10 growth-regulating factor 11 growth-regulating factor 9 growth-regulating factor 12 growth-regulating factor 10-like growth-regulating factor 11 growth-regulating factor 9 growth-regulating factor 9-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 3
gma04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00480 Glutathione metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 4
tae03020 RNA polymerase 3
tae03420 Nucleotide excision repair 3
tae03250 Viral life cycle - HIV-1 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00073 Cutin, suberine and wax biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00561 Glycerolipid metabolism 2
cit00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta02010 ABC transporters 2
nta04981 Folate transport and metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta02010 ABC transporters 2
nta04981 Folate transport and metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 819156 100306494 100795050 104649060 4330314 103627547 100286247 103866214 100261588 100242152 11412908 123052800 123141646 123426113 123401933 107924792 107936377 8076036 8074212 102601540 102608091 102619103 100837152 107795016 107799231
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