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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7465087   protein PLASTID TRANSCRIPTIONALLY ACTIVE 16, chloroplastic 
 ppo-r.4   7465087   protein PLASTID TRANSCRIPTIONALLY ACTIVE 16, chloroplastic 
 ppo-m.4   7465087   protein PLASTID TRANSCRIPTIONALLY ACTIVE 16, chloroplastic 
 ppo-u.5   7481519   protein PLASTID TRANSCRIPTIONALLY ACTIVE 16, chloroplastic 
 gma-u.5   100801140   protein PLASTID TRANSCRIPTIONALLY ACTIVE 16, chloroplastic 
 gma-u.5   100790239   protein PLASTID TRANSCRIPTIONALLY ACTIVE 16, chloroplastic 
 mtr-u.5   11416800   protein PLASTID TRANSCRIPTIONALLY ACTIVE 16, chloroplastic 
 ath-u.5   PTAC16   plastid transcriptionally active 16 
 osa-u.5   4338302   protein PLASTID TRANSCRIPTIONALLY ACTIVE 16, chloroplastic 
 zma-u.5   100383193   Protein plastid transcriptionally active 16 chloroplastic 

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Top 50 coexpressed genes to 7465087 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7465087 (ppo-u.5 coexpression data)

CoexMap"7465087"


ppoLOC7465087 | Entrez gene ID : 7465087    
Species ppo gma mtr ath osa zma hvu sot vvi tae nta bra cit ghi bna bdi sly sbi cre
Paralog 4 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
Protein XP_002299849.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9  (predict for XP_002299849.1)
Subcellular
localization
TargetP
chlo 7  (predict for XP_002299849.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7465087

.
ppo-r.4
for
7465087

.
ppo-m.4
for
7465087

.
ppo-u.5
for
7481519

.
gma-u.5
for
100801140

.
gma-u.5
for
100790239

.
mtr-u.5
for
11416800

.
ath-u.5
for
PTAC16

.
osa-u.5
for
4338302

.
zma-u.5
for
100383193

.


Ortholog ID: 10807
Species ath gma gma osa zma bra ppo ppo mtr tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol PTAC16 LOC100801140 LOC100790239 LOC4338302 LOC100383193 LOC103873836 LOC7465087 LOC7481519 LOC11416800 LOC123061785 LOC123078884 LOC123444211 LOC107954224 LOC107960015 LOC106373476 LOC106415280 LOC8066748 LOC102588617 LOC102608952 LOC100821004 LOC107791167 LOC107763187
Function* plastid transcriptionally active 16 protein PLASTID TRANSCRIPTIONALLY ACTIVE 16, chloroplastic protein PLASTID TRANSCRIPTIONALLY ACTIVE 16, chloroplastic protein PLASTID TRANSCRIPTIONALLY ACTIVE 16, chloroplastic Protein plastid transcriptionally active 16 chloroplastic protein PLASTID TRANSCRIPTIONALLY ACTIVE 16, chloroplastic protein PLASTID TRANSCRIPTIONALLY ACTIVE 16, chloroplastic protein PLASTID TRANSCRIPTIONALLY ACTIVE 16, chloroplastic protein PLASTID TRANSCRIPTIONALLY ACTIVE 16, chloroplastic protein PLASTID TRANSCRIPTIONALLY ACTIVE 16, chloroplastic protein PLASTID TRANSCRIPTIONALLY ACTIVE 16, chloroplastic protein PLASTID TRANSCRIPTIONALLY ACTIVE 16, chloroplastic protein PLASTID TRANSCRIPTIONALLY ACTIVE 16, chloroplastic protein PLASTID TRANSCRIPTIONALLY ACTIVE 16, chloroplastic protein PLASTID TRANSCRIPTIONALLY ACTIVE 16, chloroplastic-like protein PLASTID TRANSCRIPTIONALLY ACTIVE 16, chloroplastic protein plastid transcriptionally active 16, chloroplastic protein plastid transcriptionally active 16, chloroplastic protein PLASTID TRANSCRIPTIONALLY ACTIVE 16, chloroplastic protein plastid transcriptionally active 16, chloroplastic protein PLASTID TRANSCRIPTIONALLY ACTIVE 16, chloroplastic protein PLASTID TRANSCRIPTIONALLY ACTIVE 16, chloroplastic-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00195 Photosynthesis 10
ath00196 Photosynthesis - antenna proteins 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01240 Biosynthesis of cofactors 5
gma00860 Porphyrin metabolism 3
gma00195 Photosynthesis 3
gma00906 Carotenoid biosynthesis 2
gma00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00195 Photosynthesis 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00195 Photosynthesis 8
osa00860 Porphyrin metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00195 Photosynthesis 7
zma01200 Carbon metabolism 5
zma00710 Carbon fixation by Calvin cycle 4
zma00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00195 Photosynthesis 11
bra00196 Photosynthesis - antenna proteins 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00195 Photosynthesis 5
ppo00196 Photosynthesis - antenna proteins 4
ppo00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00195 Photosynthesis 3
ppo00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00195 Photosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00940 Phenylpropanoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00940 Phenylpropanoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00195 Photosynthesis 3
hvu00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00195 Photosynthesis 9
ghi00630 Glyoxylate and dicarboxylate metabolism 6
ghi00710 Carbon fixation by Calvin cycle 6
ghi01200 Carbon metabolism 6
ghi00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00195 Photosynthesis 9
ghi00630 Glyoxylate and dicarboxylate metabolism 6
ghi00710 Carbon fixation by Calvin cycle 6
ghi01200 Carbon metabolism 6
ghi00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00196 Photosynthesis - antenna proteins 10
bna00195 Photosynthesis 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00195 Photosynthesis 9
bna00196 Photosynthesis - antenna proteins 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00196 Photosynthesis - antenna proteins 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00195 Photosynthesis 13
sot00196 Photosynthesis - antenna proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00196 Photosynthesis - antenna proteins 6
cit00195 Photosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01200 Carbon metabolism 8
bdi00630 Glyoxylate and dicarboxylate metabolism 7
bdi00710 Carbon fixation by Calvin cycle 6
bdi00910 Nitrogen metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00195 Photosynthesis 8
nta01240 Biosynthesis of cofactors 3
nta00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00195 Photosynthesis 10
nta00860 Porphyrin metabolism 2
nta00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
nta01240 Biosynthesis of cofactors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 823831 100801140 100790239 4338302 100383193 103873836 7465087 7481519 11416800 123061785 123078884 123444211 107954224 107960015 106373476 106415280 8066748 102588617 102608952 100821004 107791167 107763187
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