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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-m.4   7465201   light-mediated development protein DET1 
 gma-u.5   100801685   light-mediated development protein DET1 
 gma-u.5   100790158   light-mediated development protein DET1 
 gma-u.5   100785677   light-mediated development protein DET1 
 mtr-u.5   11442566   light-mediated development protein DET1 
 ath-u.5   DET1   light-mediated development protein 1 / deetiolated1 (DET1) 
 vvi-u.5   100264330   light-mediated development protein DET1 
 sly-u.5   Det1   light-mediated development protein DET1 
 osa-u.5   4326296   light-mediated development protein DET1 
 zma-u.5   100281541   light-mediated development protein DET1 
 zma-u.5   100273813   uncharacterized LOC100273813 

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Top 50 coexpressed genes to 7465201 (ppo-m.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7465201 (ppo-m.4 coexpression data)

CoexMap"7465201"


ppoLOC7465201 | Entrez gene ID : 7465201    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 1 3 1 1 1 1 1 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG pop04120 [list] [network] Ubiquitin mediated proteolysis (184 genes)
GO BP
GO:0032436 [list] [network] positive regulation of proteasomal ubiquitin-dependent protein catabolic process  (38 genes)  IEA  
GO:0016567 [list] [network] protein ubiquitination  (417 genes)  IEA  
GO:0005975 [list] [network] carbohydrate metabolic process  (863 genes)  IEA  
GO CC
GO:0031461 [list] [network] cullin-RING ubiquitin ligase complex  (129 genes)  IEA  
GO:0005634 [list] [network] nucleus  (3662 genes)  IEA  
GO MF
GO:1990756 [list] [network] ubiquitin-like ligase-substrate adaptor activity  (1 genes)  IEA  
GO:0031625 [list] [network] ubiquitin protein ligase binding  (47 genes)  IEA  
Protein XP_024439370.1 [sequence] [blastp]
XP_024439371.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  nucl 3  (predict for XP_024439370.1)
chlo 6,  nucl 3  (predict for XP_024439371.1)
Subcellular
localization
TargetP
mito 8  (predict for XP_024439370.1)
mito 8  (predict for XP_024439371.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-m.4
for
7465201

.
gma-u.5
for
100801685

.
gma-u.5
for
100790158

.
gma-u.5
for
100785677

.
mtr-u.5
for
11442566

.
ath-u.5
for
DET1

.
vvi-u.5
for
100264330

.
sly-u.5
for
Det1

.
osa-u.5
for
4326296

.
zma-u.5
for
100281541

.
zma-u.5
for
100273813

.


Ortholog ID: 8531
Species ath gma gma sly osa zma zma bra vvi mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol DET1 LOC100785677 LOC100790158 Det1 LOC4326296 LOC100273813 LOC100281541 LOC103858553 LOC100264330 LOC11442566 LOC123097641 LOC123085700 LOC123443632 LOC107898887 LOC107949219 LOC106423569 LOC106436448 CHLRE_13g571560v5 LOC8080887 LOC102577910 LOC102608186 LOC100845485 LOC107817062 LOC107785321
Function* light-mediated development protein 1 / deetiolated1 (DET1) light-mediated development protein DET1 light-mediated development protein DET1 light-mediated development protein DET1 light-mediated development protein DET1 uncharacterized LOC100273813 light-mediated development protein DET1 light-mediated development protein DET1 light-mediated development protein DET1 light-mediated development protein DET1 light-mediated development protein DET1 light-mediated development protein DET1 light-mediated development protein DET1 light-mediated development protein DET1 light-mediated development protein DET1 light-mediated development protein DET1 light-mediated development protein DET1 uncharacterized protein light-mediated development protein DET1 deetiolated 1-like protein light-mediated development protein DET1 light-mediated development protein DET1 light-mediated development protein DET1 light-mediated development protein DET1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 3
gma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00053 Ascorbate and aldarate metabolism 3
mtr00561 Glycerolipid metabolism 2
mtr00562 Inositol phosphate metabolism 2
mtr01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 4
tae03082 ATP-dependent chromatin remodeling 3
tae03022 Basal transcription factors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 4
tae03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 4
ghi04120 Ubiquitin mediated proteolysis 2
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 4
ghi04120 Ubiquitin mediated proteolysis 2
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03082 ATP-dependent chromatin remodeling 2
sot03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03015 mRNA surveillance pathway 2
nta00970 Aminoacyl-tRNA biosynthesis 2
nta00350 Tyrosine metabolism 2
nta00360 Phenylalanine metabolism 2
nta00380 Tryptophan metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03430 Mismatch repair 2
nta00350 Tyrosine metabolism 2
nta00360 Phenylalanine metabolism 2
nta00380 Tryptophan metabolism 2
nta00901 Indole alkaloid biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 826609 100785677 100790158 778329 4326296 100273813 100281541 103858553 100264330 11442566 123097641 123085700 123443632 107898887 107949219 106423569 106436448 5719148 8080887 102577910 102608186 100845485 107817062 107785321
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