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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-m.4   7465225   polygalacturonase At1g48100 
 ppo-u.5   7498233   polygalacturonase At1g48100 
 gma-u.5   PG7   polygalacturonase precursor 
 gma-u.5   100820085   polygalacturonase At1g48100 
 gma-u.5   100797770   polygalacturonase At1g48100 
 mtr-u.5   11410191   polygalacturonase At1g48100 
 mtr-u.5   11412440   polygalacturonase At1g48100 
 mtr-u.5   11435306   polygalacturonase At1g48100 
 ath-u.5   AT1G02460   Pectin lyase-like superfamily protein 
 ath-u.5   AT1G48100   Pectin lyase-like superfamily protein 
 vvi-u.5   100264928   polygalacturonase At1g48100 
 vvi-u.5   100263206   polygalacturonase At1g48100 
 sly-u.5   101259291   polygalacturonase At1g48100 
 sly-u.5   101261316   polygalacturonase At1g48100 
 sly-u.5   101266864   polygalacturonase At1g48100 
 osa-u.5   4326721   polygalacturonase At1g48100 
 osa-u.5   4326983   polygalacturonase At1g48100 
 osa-u.5   4338287   polygalacturonase At1g48100 
 zma-u.5   100194076   uncharacterized LOC100194076 
 zma-u.5   103635045   polygalacturonase At1g48100 
 zma-u.5   103635108   polygalacturonase At1g48100 

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Top 50 coexpressed genes to 7465225 (ppo-m.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7465225 (ppo-m.4 coexpression data)

CoexMap"7465225"


ppoLOC7465225 | Entrez gene ID : 7465225    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 2 3 3 2 2 3 3 3 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0005975 [list] [network] carbohydrate metabolic process  (863 genes)  IEA  
GO CC
GO MF
GO:0004650 [list] [network] polygalacturonase activity  (77 genes)  IEA  
Protein XP_002318932.2 [sequence] [blastp]
XP_024438724.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  extr 4,  cyto 1,  vacu 1  (predict for XP_002318932.2)
chlo 4,  extr 4,  cyto 1,  vacu 1  (predict for XP_024438724.1)
Subcellular
localization
TargetP
scret 5  (predict for XP_002318932.2)
scret 5  (predict for XP_024438724.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-m.4
for
7465225

.
ppo-u.5
for
7498233

.
gma-u.5
for
PG7

.
gma-u.5
for
100820085

.
gma-u.5
for
100797770

.
mtr-u.5
for
11410191

.
mtr-u.5
for
11412440

.
mtr-u.5
for
11435306

.
ath-u.5
for
AT1G02460

.
ath-u.5
for
AT1G48100

.
vvi-u.5
for
100264928

.
vvi-u.5
for
100263206

.
sly-u.5
for
101259291

.
sly-u.5
for
101261316

.
sly-u.5
for
101266864

.
osa-u.5
for
4326721

.
osa-u.5
for
4326983

.
osa-u.5
for
4338287

.
zma-u.5
for
100194076

.
zma-u.5
for
103635045

.
zma-u.5
for
103635108

.


Ortholog ID: 1363
Species ath ath gma sly sly osa osa zma zma bra bra vvi mtr mtr tae tae hvu hvu bna bna sbi sbi sot cit bdi nta nta
Symbol AT1G48100 AT1G02460 LOC100797770 LOC101261316 LOC101259291 LOC4326721 LOC4326983 LOC100194076 LOC103635045 LOC103871496 LOC103843750 LOC100263206 LOC11410191 LOC11435306 LOC123160906 LOC123060823 LOC123413542 LOC123410081 LOC106352669 LOC106370081 LOC8075300 LOC8060309 LOC102589249 LOC102625396 LOC100827672 LOC107802133 LOC107782467
Function* Pectin lyase-like superfamily protein Pectin lyase-like superfamily protein polygalacturonase At1g48100 polygalacturonase At1g48100 polygalacturonase At1g48100 polygalacturonase At1g48100 polygalacturonase At1g48100 uncharacterized LOC100194076 polygalacturonase At1g48100 polygalacturonase At1g48100 polygalacturonase At1g48100 polygalacturonase At1g48100 polygalacturonase At1g48100 polygalacturonase At1g48100 polygalacturonase At1g48100 polygalacturonase At1g48100 polygalacturonase At1g48100-like polygalacturonase At1g48100-like polygalacturonase At1g48100-like polygalacturonase At1g48100 polygalacturonase At1g48100 polygalacturonase At1g48100 polygalacturonase At1g48100 polygalacturonase At1g48100 polygalacturonase At1g48100 polygalacturonase At1g48100-like polygalacturonase At1g48100-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00940 Phenylpropanoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04712 Circadian rhythm - plant 2
bra00190 Oxidative phosphorylation 2
bra01200 Carbon metabolism 2
bra00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00940 Phenylpropanoid biosynthesis 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00010 Glycolysis / Gluconeogenesis 3
hvu00710 Carbon fixation by Calvin cycle 3
hvu01200 Carbon metabolism 3
hvu01230 Biosynthesis of amino acids 3
hvu03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta02010 ABC transporters 2
nta04981 Folate transport and metabolism 2
nta00040 Pentose and glucuronate interconversions 2
nta04075 Plant hormone signal transduction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 841228 839443 100797770 101261316 101259291 4326721 4326983 100194076 103635045 103871496 103843750 100263206 11410191 11435306 123160906 123060823 123413542 123410081 106352669 106370081 8075300 8060309 102589249 102625396 100827672 107802133 107782467
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