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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7465366   protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 
 ppo-r.4   7465366   protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 
 gma-u.5   100790985   protein PLASTID TRANSCRIPTIONALLY ACTIVE 14-like 
 gma-u.5   100786962   protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 
 mtr-u.5   11437638   protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 
 ath-u.5   PTAC14   plastid transcriptionally active 14 
 vvi-u.5   100264713   protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 
 sly-u.5   101252349   protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 
 osa-u.5   4339764   protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 
 zma-u.5   100279779   plastid transcriptionally active14 

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Top 50 coexpressed genes to 7465366 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7465366 (ppo-u.5 coexpression data)

CoexMap"7465366"


ppoLOC7465366 | Entrez gene ID : 7465366    
Species ppo gma mtr ath vvi sly osa zma cre ghi cit hvu bdi sot bra sbi tae nta bna
Paralog 2 2 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0042793 [list] [network] plastid transcription  (5 genes)  IEA  
GO:0018026 [list] [network] peptidyl-lysine monomethylation  (12 genes)  IEA  
GO:0010027 [list] [network] thylakoid membrane organization  (18 genes)  IEA  
GO:0009658 [list] [network] chloroplast organization  (99 genes)  IEA  
GO CC
GO:0000427 [list] [network] plastid-encoded plastid RNA polymerase complex  (4 genes)  IEA  
GO:0009534 [list] [network] chloroplast thylakoid  (147 genes)  IEA  
GO MF
GO:0016279 [list] [network] protein-lysine N-methyltransferase activity  (26 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4916 genes)  IEA  
Protein XP_024452419.2 [sequence] [blastp]
XP_052307772.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  mito 2,  cysk_nucl 2,  mito_plas 1  (predict for XP_024452419.2)
nucl 4,  mito 2,  mito_plas 1,  cyto 1,  chlo 1,  golg 1,  cyto_pero 1,  cyto_E.R. 1  (predict for XP_052307772.1)
Subcellular
localization
TargetP
chlo 7,  other 3  (predict for XP_024452419.2)
chlo 7,  other 3  (predict for XP_052307772.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7465366

.
ppo-r.4
for
7465366

.
gma-u.5
for
100790985

.
gma-u.5
for
100786962

.
mtr-u.5
for
11437638

.
ath-u.5
for
PTAC14

.
vvi-u.5
for
100264713

.
sly-u.5
for
101252349

.
osa-u.5
for
4339764

.
zma-u.5
for
100279779

.


Ortholog ID: 7284
Species ath gma gma sly osa zma bra vvi ppo mtr tae hvu hvu ghi ghi bna bna cre cre sbi sot cit bdi nta nta
Symbol PTAC14 LOC100786962 LOC100790985 LOC101252349 LOC4339764 LOC100279779 LOC103834151 LOC100264713 LOC7465366 LOC11437638 LOC123070075 LOC123452251 LOC123452269 LOC107958695 LOC107944382 LOC125583872 LOC106389871 CHLRE_03g201332v5 CHLRE_16g649700v5 LOC8065299 LOC102593548 LOC102610649 LOC100845588 LOC107826747 LOC107814338
Function* plastid transcriptionally active 14 protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 protein PLASTID TRANSCRIPTIONALLY ACTIVE 14-like protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 plastid transcriptionally active14 protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 protein PLASTID TRANSCRIPTIONALLY ACTIVE 14-like protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 uncharacterized protein uncharacterized protein protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 protein PLASTID TRANSCRIPTIONALLY ACTIVE 14-like protein PLASTID TRANSCRIPTIONALLY ACTIVE 14-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03060 Protein export 2
zma03010 Ribosome 2
zma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00240 Pyrimidine metabolism 2
bra01232 Nucleotide metabolism 2
bra01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 4
vvi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00710 Carbon fixation by Calvin cycle 5
cre01200 Carbon metabolism 5
cre00500 Starch and sucrose metabolism 4
cre00030 Pentose phosphate pathway 3
cre00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04626 Plant-pathogen interaction 3
nta04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 2
nta04626 Plant-pathogen interaction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 827759 100786962 100790985 101252349 4339764 100279779 103834151 100264713 7465366 11437638 123070075 123452251 123452269 107958695 107944382 125583872 106389871 66052996 5723812 8065299 102593548 102610649 100845588 107826747 107814338
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