ATTED-II : GeneCoexpression result

Species	Gene	Description
ppo-u.5	7466003	2-Cys peroxiredoxin BAS1, chloroplastic
ppo-r.4	7466003	2-Cys peroxiredoxin BAS1, chloroplastic
ppo-m.4	7466003	2-Cys peroxiredoxin BAS1, chloroplastic
ppo-u.5	7469956	2-Cys peroxiredoxin BAS1, chloroplastic
gma-u.5	100817464	2-Cys peroxiredoxin BAS1, chloroplastic
gma-u.5	100786990	2-cys peroxiredoxin
mtr-u.5	25499456	2-Cys peroxiredoxin BAS1, chloroplastic
mtr-u.5	11420246	2-Cys peroxiredoxin BAS1, chloroplastic
ath-u.5	AT3G11630	Thioredoxin superfamily protein
ath-u.5	2-Cys Prx B	2-cysteine peroxiredoxin B
vvi-u.5	100259748	2-Cys peroxiredoxin
sly-u.5	2-CP1	2-Cys peroxiredoxin 1
sly-u.5	2-CP2	2-Cys peroxiredoxin 2
osa-u.5	4329578	2-Cys peroxiredoxin BAS1, chloroplastic-like
zma-u.5	100217217	2-cys peroxiredoxin BAS1
zma-u.5	100282595	2-cys peroxiredoxin BAS1

Annotation

functional annotation

KEGG

GO BP

GO:0045454 [list] [network] cell redox homeostasis	(23 genes)	IEA
GO:0042744 [list] [network] hydrogen peroxide catabolic process	(118 genes)	IEA
GO:0006979 [list] [network] response to oxidative stress	(196 genes)	IEA
GO:0033554 [list] [network] cellular response to stress	(516 genes)	IEA

GO CC

GO MF

GO:0008379 [list] [network] thioredoxin peroxidase activity

(8 genes)

IEA

Protein

XP_002309395.3 [sequence] [blastp]

Subcellular
localization
wolf

chlo 9

(predict for XP_002309395.3)

Subcellular
localization
TargetP

chlo 9

(predict for XP_002309395.3)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ppo-u.5 for 7466003 .	ppo-r.4 for 7466003 .	ppo-m.4 for 7466003 .	ppo-u.5 for 7469956 .	gma-u.5 for 100817464 .	gma-u.5 for 100786990 .	mtr-u.5 for 25499456 .	mtr-u.5 for 11420246 .	ath-u.5 for AT3G11630 .	ath-u.5 for 2-Cys Prx B .	vvi-u.5 for 100259748 .	sly-u.5 for 2-CP1 .	sly-u.5 for 2-CP2 .	osa-u.5 for 4329578 .	zma-u.5 for 100217217 .	zma-u.5 for 100282595 .

Ortholog

Ortholog ID: 4378

Species

ath

gma

sly

osa

zma

bra

vvi

ppo

mtr

tae

hvu

ghi

bna

cre

sbi

sot

cit

bdi

nta

Symbol

2-CP2

2-CP1

Function^*

2-cysteine peroxiredoxin B

Thioredoxin superfamily protein

2-cys peroxiredoxin

2-Cys peroxiredoxin BAS1, chloroplastic

2-Cys peroxiredoxin 2

2-Cys peroxiredoxin 1

2-Cys peroxiredoxin BAS1, chloroplastic-like

2-cys peroxiredoxin BAS1

2-Cys peroxiredoxin BAS1-like, chloroplastic

2-Cys peroxiredoxin BAS1, chloroplastic

2-Cys peroxiredoxin

2-Cys peroxiredoxin BAS1, chloroplastic

uncharacterized protein

2-Cys peroxiredoxin BAS1, chloroplastic

2-Cys peroxiredoxin BAS1, chloroplastic-like

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03010	Ribosome	9

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03010	Ribosome	12

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	14

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	11

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly01230	Biosynthesis of amino acids	7
sly01210	2-Oxocarboxylic acid metabolism	5
sly00290	Valine, leucine and isoleucine biosynthesis	3
sly01240	Biosynthesis of cofactors	2
sly00220	Arginine biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly01200	Carbon metabolism	4
sly03010	Ribosome	4
sly00630	Glyoxylate and dicarboxylate metabolism	3
sly01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03010	Ribosome	14

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03010	Ribosome	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03010	Ribosome	11

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03010	Ribosome	16

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03010	Ribosome	12

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	5
vvi01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo01240	Biosynthesis of cofactors	3
ppo00240	Pyrimidine metabolism	2
ppo01232	Nucleotide metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03010	Ribosome	7
ppo00710	Carbon fixation by Calvin cycle	5
ppo01200	Carbon metabolism	5
ppo01230	Biosynthesis of amino acids	4
ppo00030	Pentose phosphate pathway	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03010	Ribosome	5
mtr01200	Carbon metabolism	5
mtr00710	Carbon fixation by Calvin cycle	4
mtr01230	Biosynthesis of amino acids	3
mtr00350	Tyrosine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03010	Ribosome	11

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03010	Ribosome	5
tae00190	Oxidative phosphorylation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03010	Ribosome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03010	Ribosome	12

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03010	Ribosome	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03010	Ribosome	4
ghi00970	Aminoacyl-tRNA biosynthesis	2
ghi00520	Amino sugar and nucleotide sugar metabolism	2
ghi00561	Glycerolipid metabolism	2
ghi00566	Sulfoquinovose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00630	Glyoxylate and dicarboxylate metabolism	2
bna00650	Butanoate metabolism	2
bna01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre00620	Pyruvate metabolism	7
cre01200	Carbon metabolism	7
cre00061	Fatty acid biosynthesis	6
cre01212	Fatty acid metabolism	6
cre00010	Glycolysis / Gluconeogenesis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi01230	Biosynthesis of amino acids	2
sbi00350	Tyrosine metabolism	2
sbi00360	Phenylalanine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03010	Ribosome	9

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot01240	Biosynthesis of cofactors	4
sot00061	Fatty acid biosynthesis	2
sot01212	Fatty acid metabolism	2
sot00860	Porphyrin metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03010	Ribosome	6
cit01200	Carbon metabolism	3
cit01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03010	Ribosome	14

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03010	Ribosome	12

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta01230	Biosynthesis of amino acids	4
nta00010	Glycolysis / Gluconeogenesis	3
nta00051	Fructose and mannose metabolism	3
nta00562	Inositol phosphate metabolism	3
nta00710	Carbon fixation by Calvin cycle	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00010	Glycolysis / Gluconeogenesis	3
nta00051	Fructose and mannose metabolism	3
nta00562	Inositol phosphate metabolism	3
nta00710	Carbon fixation by Calvin cycle	3
nta01200	Carbon metabolism	3

Expression

Expression pattern

Entrez Gene ID^*

830517

820335

100786990

100817464

101256114

101250263

4329578

100217217

100282595

103846970

103870326

100259748

7466003

7469956

25499456

11420246

123045423

542768

123426692

107948560

107898212

106452491

106450458

5722095

110434977

102583123

102583732

102619222

100823900

100842398

107807034

107793503

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 7466003 (ppo-u.5 coexpression data)

Top 50 enrichment test to 7466003 (ppo-u.5 coexpression data)


Species	ppo	gma	mtr	ath	vvi	sly	osa	zma	sbi	nta	bra	cre	hvu	cit	bdi	sot	tae	bna	ghi
Paralog	4	2	2	2	1	2	1	2	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 7466003 (ppo-u.5 coexpression data)

Top 50 enrichment test to 7466003 (ppo-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**