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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7466269   methyl-CpG-binding domain-containing protein 4 
 ppo-r.4   7466269   methyl-CpG-binding domain-containing protein 4 
 ppo-m.4   7466269   methyl-CpG-binding domain-containing protein 4 
 ppo-u.5   18096522   methyl-CpG-binding domain-containing protein 4 
 gma-u.5   100790199   methyl-CpG-binding domain-containing protein 4 
 gma-u.5   100802350   methyl-CpG-binding domain-containing protein 4-like 
 mtr-u.5   120575923   methyl-CpG-binding domain-containing protein 4 
 mtr-u.5   120580900   methyl-CpG-binding domain-containing protein 4 
 mtr-u.5   112418415   methyl-CpG-binding domain-containing protein 4 
 ath-u.5   MBD4   methyl-CPG-binding domain 4 
 ath-u.5   MBD1   methyl-CPG-binding domain 1 
 vvi-u.5   100245968   methyl-CpG-binding domain-containing protein 4 
 sly-u.5   101249559   histidine-containing phosphotransfer protein 1 
 osa-u.5   4338748   methyl-CpG-binding domain-containing protein 4 
 osa-u.5   4338749   methyl-CpG-binding domain-containing protein 4 
 zma-u.5   mbd101   methyl-binding domain 101 
 zma-u.5   mbd120   methyl binding domain protein 120 

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Top 50 coexpressed genes to 7466269 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7466269 (ppo-u.5 coexpression data)

CoexMap"7466269"


ppoLOC7466269 | Entrez gene ID : 7466269    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 4 2 3 2 1 1 2 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (777 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (2205 genes)  IEA  
Protein XP_002320386.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  cysk_nucl 3,  extr 3,  cyto 1,  mito 1  (predict for XP_002320386.1)
Subcellular
localization
TargetP
other 5,  chlo 3  (predict for XP_002320386.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7466269

.
ppo-r.4
for
7466269

.
ppo-m.4
for
7466269

.
ppo-u.5
for
18096522

.
gma-u.5
for
100790199

.
gma-u.5
for
100802350

.
mtr-u.5
for
120575923

.
mtr-u.5
for
120580900

.
mtr-u.5
for
112418415

.
ath-u.5
for
MBD4

.
ath-u.5
for
MBD1

.
vvi-u.5
for
100245968

.
sly-u.5
for
101249559

.
osa-u.5
for
4338748

.
osa-u.5
for
4338749

.
zma-u.5
for
mbd101

.
zma-u.5
for
mbd120

.


Ortholog ID: 4098
Species ath ath gma gma sly osa osa zma zma bra vvi ppo ppo mtr mtr tae tae hvu bna bna sbi sbi sot cit bdi nta nta
Symbol MBD4 MBD1 LOC100802350 LOC100790199 LOC101249559 LOC4338748 LOC4338749 mbd120 mbd101 LOC103842108 LOC100245968 LOC7466269 LOC18096522 LOC25479683 LOC120580897 LOC123132422 LOC123181968 LOC123441601 LOC106375238 LOC106377832 LOC8076886 LOC8085114 LOC102602958 LOC102610395 LOC100823463 LOC107759154 LOC107831520
Function* methyl-CPG-binding domain 4 methyl-CPG-binding domain 1 methyl-CpG-binding domain-containing protein 4-like methyl-CpG-binding domain-containing protein 4 histidine-containing phosphotransfer protein 1 methyl-CpG-binding domain-containing protein 4 methyl-CpG-binding domain-containing protein 4 methyl binding domain protein 120 methyl-binding domain 101 methyl-CpG-binding domain-containing protein 4 methyl-CpG-binding domain-containing protein 4 methyl-CpG-binding domain-containing protein 4 methyl-CpG-binding domain-containing protein 4 methyl-CpG-binding domain-containing protein 4 methyl-CpG-binding domain-containing protein 4 methyl-CpG-binding domain-containing protein 4 methyl-CpG-binding domain-containing protein 4 methyl-CpG-binding domain-containing protein 4-like methyl-CpG-binding domain-containing protein 4-like methyl-CpG-binding domain-containing protein 4-like methyl-CpG-binding domain-containing protein 4 methyl-CpG-binding domain-containing protein 1 methyl-CpG-binding domain-containing protein 4-like methyl-CpG-binding domain-containing protein 4-like methyl-CpG-binding domain-containing protein 4 methyl-CpG-binding domain-containing protein 4 methyl-CpG-binding domain-containing protein 4
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 3
ath03020 RNA polymerase 2
ath03420 Nucleotide excision repair 2
ath03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03050 Proteasome 2
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04130 SNARE interactions in vesicular transport 2
sly04136 Autophagy - other 2
sly04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03022 Basal transcription factors 2
zma00620 Pyruvate metabolism 2
zma01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03018 RNA degradation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00100 Steroid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
hvu04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04130 SNARE interactions in vesicular transport 5
bna04141 Protein processing in endoplasmic reticulum 4
bna04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04130 SNARE interactions in vesicular transport 5
bna04141 Protein processing in endoplasmic reticulum 4
bna04144 Endocytosis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04120 Ubiquitin mediated proteolysis 4
sbi03420 Nucleotide excision repair 3
sbi04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03020 RNA polymerase 2
cit03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04120 Ubiquitin mediated proteolysis 4
bdi04141 Protein processing in endoplasmic reticulum 3
bdi03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03020 RNA polymerase 2
nta03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03020 RNA polymerase 2
nta03420 Nucleotide excision repair 2
nta00230 Purine metabolism 2
nta00250 Alanine, aspartate and glutamate metabolism 2
nta01232 Nucleotide metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 825478 828371 100802350 100790199 101249559 4338748 4338749 103630345 542066 103842108 100245968 7466269 18096522 25479683 120580897 123132422 123181968 123441601 106375238 106377832 8076886 8085114 102602958 102610395 100823463 107759154 107831520
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