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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7466284   DEAD-box ATP-dependent RNA helicase 41 
 ppo-r.4   7466284   DEAD-box ATP-dependent RNA helicase 41 
 ppo-m.4   7466284   DEAD-box ATP-dependent RNA helicase 41 
 gma-u.5   100784491   DEAD-box ATP-dependent RNA helicase 41 
 gma-u.5   100781473   DEAD-box ATP-dependent RNA helicase 41 
 mtr-u.5   25495880   DEAD-box ATP-dependent RNA helicase 41 
 ath-u.5   AT3G02065   P-loop containing nucleoside triphosphate hydrolases superfamily protein 
 vvi-u.5   100242882   DEAD-box ATP-dependent RNA helicase 41 
 sly-u.5   101250831   DEAD-box ATP-dependent RNA helicase 41 
 osa-u.5   4328652   DEAD-box ATP-dependent RNA helicase 41-like 
 zma-u.5   103626807   DEAD-box ATP-dependent RNA helicase 41 

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Top 50 coexpressed genes to 7466284 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7466284 (ppo-u.5 coexpression data)

CoexMap"7466284"


ppoLOC7466284 | Entrez gene ID : 7466284    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 3 2 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0003724 [list] [network] RNA helicase activity  (68 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1480 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (2559 genes)  IEA  
Protein XP_002320399.1 [sequence] [blastp]
XP_024441302.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  cyto 4,  chlo 1  (predict for XP_002320399.1)
nucl 5,  cyto 4,  chlo 1  (predict for XP_024441302.1)
Subcellular
localization
TargetP
other 8  (predict for XP_002320399.1)
other 8  (predict for XP_024441302.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7466284

.
ppo-r.4
for
7466284

.
ppo-m.4
for
7466284

.
gma-u.5
for
100784491

.
gma-u.5
for
100781473

.
mtr-u.5
for
25495880

.
ath-u.5
for
AT3G02065

.
vvi-u.5
for
100242882

.
sly-u.5
for
101250831

.
osa-u.5
for
4328652

.
zma-u.5
for
103626807

.


Ortholog ID: 11311
Species ath gma gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol AT3G02065 LOC100784491 LOC100781473 LOC101250831 LOC4328652 LOC103626807 LOC103849866 LOC100242882 LOC7466284 LOC25495880 LOC123144363 LOC123127286 LOC123403114 LOC107914181 LOC107897322 LOC106393724 LOC106436515 LOC8071654 LOC102589682 LOC102612320 LOC100830215 LOC107828010 LOC107788661
Function* P-loop containing nucleoside triphosphate hydrolases superfamily protein DEAD-box ATP-dependent RNA helicase 41 DEAD-box ATP-dependent RNA helicase 41 DEAD-box ATP-dependent RNA helicase 41 DEAD-box ATP-dependent RNA helicase 41-like DEAD-box ATP-dependent RNA helicase 41 DEAD-box ATP-dependent RNA helicase 41 DEAD-box ATP-dependent RNA helicase 41 DEAD-box ATP-dependent RNA helicase 41 DEAD-box ATP-dependent RNA helicase 41 DEAD-box ATP-dependent RNA helicase 41 DEAD-box ATP-dependent RNA helicase 41 DEAD-box ATP-dependent RNA helicase 41 DEAD-box ATP-dependent RNA helicase 41 DEAD-box ATP-dependent RNA helicase 41 DEAD-box ATP-dependent RNA helicase 41 DEAD-box ATP-dependent RNA helicase 41-like DEAD-box ATP-dependent RNA helicase 41 DEAD-box ATP-dependent RNA helicase 41 DEAD-box ATP-dependent RNA helicase 41 DEAD-box ATP-dependent RNA helicase 41 DEAD-box ATP-dependent RNA helicase 41 DEAD-box ATP-dependent RNA helicase 41-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 3
sly03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 2
vvi03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04141 Protein processing in endoplasmic reticulum 2
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03015 mRNA surveillance pathway 5
tae04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 3
tae04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 821155 100784491 100781473 101250831 4328652 103626807 103849866 100242882 7466284 25495880 123144363 123127286 123403114 107914181 107897322 106393724 106436515 8071654 102589682 102612320 100830215 107828010 107788661
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