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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7466892   acyl-acyl carrier protein thioesterase TE3, chloroplastic 
 ppo-r.4   7466892   acyl-acyl carrier protein thioesterase TE3, chloroplastic 
 ppo-m.4   7466892   acyl-acyl carrier protein thioesterase TE3, chloroplastic 
 gma-u.5   MKS2   methylketone synthase 2 
 mtr-u.5   11406694   acyl-acyl carrier protein thioesterase ATL3, chloroplastic 
 ath-u.5   AT1G35250   Thioesterase superfamily protein 
 ath-u.5   AT1G68260   Thioesterase superfamily protein 
 vvi-u.5   100250950   acyl-acyl carrier protein thioesterase TE3, chloroplastic 
 vvi-u.5   100268132   acyl-acyl carrier protein thioesterase TE3, chloroplastic 
 sly-u.5   MKS2b   methylketone synthase IIb 
 sly-u.5   MKS2   methylketone synthase IIa 
 osa-u.5   107276276   acyl-acyl carrier protein thioesterase ATL4, chloroplastic 
 zma-u.5   100502341   Acyl-acyl carrier protein thioesterase ATL3 chloroplastic 

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Top 50 coexpressed genes to 7466892 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7466892 (ppo-u.5 coexpression data)

CoexMap"7466892"


ppoLOC7466892 | Entrez gene ID : 7466892    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 3 1 1 2 2 2 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0009507 [list] [network] chloroplast  (718 genes)  IEA  
GO MF
GO:0016297 [list] [network] fatty acyl-[ACP] hydrolase activity  (12 genes)  IEA  
Protein XP_052312618.1 [sequence] [blastp]
XP_052312619.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  chlo_mito 5  (predict for XP_052312618.1)
chlo 9,  chlo_mito 5  (predict for XP_052312619.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_052312618.1)
chlo 9  (predict for XP_052312619.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7466892

.
ppo-r.4
for
7466892

.
ppo-m.4
for
7466892

.
gma-u.5
for
MKS2

.
mtr-u.5
for
11406694

.
ath-u.5
for
AT1G35250

.
ath-u.5
for
AT1G68260

.
vvi-u.5
for
100250950

.
vvi-u.5
for
100268132

.
sly-u.5
for
MKS2b

.
sly-u.5
for
MKS2

.
osa-u.5
for
107276276

.
zma-u.5
for
100502341

.


Ortholog ID: 3282
Species ath gma sly zma bra vvi vvi ppo mtr ghi ghi cre sbi sot sot cit bdi nta nta
Symbol AT1G68260 MKS2 MKS2b LOC100502341 LOC103831241 LOC100250950 LOC100268132 LOC7466892 LOC11406694 LOC121228182 LOC121228183 CHLRE_04g213761v5 LOC8055968 LOC102595992 LOC102593733 LOC102621919 LOC100838144 LOC107801358 LOC107827593
Function* Thioesterase superfamily protein methylketone synthase 2 methylketone synthase IIb Acyl-acyl carrier protein thioesterase ATL3 chloroplastic acyl-acyl carrier protein thioesterase ATL3, chloroplastic acyl-acyl carrier protein thioesterase TE3, chloroplastic acyl-acyl carrier protein thioesterase TE3, chloroplastic acyl-acyl carrier protein thioesterase TE3, chloroplastic acyl-acyl carrier protein thioesterase ATL3, chloroplastic acyl-acyl carrier protein thioesterase ATL3, chloroplastic acyl-acyl carrier protein thioesterase ATL3, chloroplastic uncharacterized protein acyl-acyl carrier protein thioesterase ATL3, chloroplastic uncharacterized LOC102595992 uncharacterized LOC102593733 hypothetical protein acyl-acyl carrier protein thioesterase ATL3, chloroplastic acyl-acyl carrier protein thioesterase TE3, chloroplastic acyl-acyl carrier protein thioesterase TE3, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01230 Biosynthesis of amino acids 4
ath00541 Biosynthesis of various nucleotide sugars 2
ath01250 Biosynthesis of nucleotide sugars 2
ath00220 Arginine biosynthesis 2
ath01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00620 Pyruvate metabolism 5
gma01200 Carbon metabolism 5
gma00061 Fatty acid biosynthesis 5
gma01212 Fatty acid metabolism 5
gma01240 Biosynthesis of cofactors 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 5
sly04016 MAPK signaling pathway - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00630 Glyoxylate and dicarboxylate metabolism 3
bra01200 Carbon metabolism 3
bra04141 Protein processing in endoplasmic reticulum 2
bra00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04016 MAPK signaling pathway - plant 4
vvi04075 Plant hormone signal transduction 3
vvi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 4
ppo00860 Porphyrin metabolism 3
ppo01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00061 Fatty acid biosynthesis 8
mtr01212 Fatty acid metabolism 8
mtr00620 Pyruvate metabolism 7
mtr01200 Carbon metabolism 7
mtr01240 Biosynthesis of cofactors 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00061 Fatty acid biosynthesis 6
ghi00780 Biotin metabolism 6
ghi01212 Fatty acid metabolism 6
ghi01240 Biosynthesis of cofactors 6
ghi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00061 Fatty acid biosynthesis 4
ghi00780 Biotin metabolism 4
ghi01212 Fatty acid metabolism 4
ghi01240 Biosynthesis of cofactors 4
ghi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00220 Arginine biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00010 Glycolysis / Gluconeogenesis 3
sbi01200 Carbon metabolism 3
sbi01230 Biosynthesis of amino acids 3
sbi03018 RNA degradation 2
sbi04820 Cytoskeleton in muscle cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01240 Biosynthesis of cofactors 4
sot00061 Fatty acid biosynthesis 3
sot01212 Fatty acid metabolism 3
sot03040 Spliceosome 2
sot01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00220 Arginine biosynthesis 2
nta01210 2-Oxocarboxylic acid metabolism 2
nta01230 Biosynthesis of amino acids 2
nta00190 Oxidative phosphorylation 2
nta04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00220 Arginine biosynthesis 2
nta01210 2-Oxocarboxylic acid metabolism 2
nta01230 Biosynthesis of amino acids 2
nta04144 Endocytosis 2
nta00270 Cysteine and methionine metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 843155 100806931 101260040 100502341 103831241 100250950 100268132 7466892 11406694 121228182 121228183 5728656 8055968 102595992 102593733 102621919 100838144 107801358 107827593
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