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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7467397   protein CHROMATIN REMODELING 5 
 ppo-r.4   7467397   protein CHROMATIN REMODELING 5 
 ppo-u.5   7461648   protein CHROMATIN REMODELING 5 
 gma-u.5   100808039   protein CHROMATIN REMODELING 5 
 gma-u.5   100792398   protein CHROMATIN REMODELING 5 
 mtr-u.5   11425259   protein CHROMATIN REMODELING 5 
 mtr-u.5   11435417   protein CHROMATIN REMODELING 5 
 ath-u.5   CHR5   chromatin remodeling 5 
 vvi-u.5   100261898   protein CHROMATIN REMODELING 5 
 sly-u.5   101252967   protein CHROMATIN REMODELING 5 
 osa-u.5   4344175   protein CHROMATIN REMODELING 5 
 zma-u.5   103647912   protein CHROMATIN REMODELING 5 
 zma-u.5   103633530   protein CHROMATIN REMODELING 5 

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Top 50 coexpressed genes to 7467397 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7467397 (ppo-u.5 coexpression data)

CoexMap"7467397"


ppoLOC7467397 | Entrez gene ID : 7467397    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 3 2 2 1 1 1 1 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0034728 [list] [network] nucleosome organization  (64 genes)  IEA  
GO:0006357 [list] [network] regulation of transcription by RNA polymerase II  (481 genes)  IEA  
GO CC
GO:0000785 [list] [network] chromatin  (236 genes)  IEA  
GO:0005634 [list] [network] nucleus  (3662 genes)  IEA  
GO MF
GO:0140658 [list] [network] ATP-dependent chromatin remodeler activity  (53 genes)  IEA  
GO:0042393 [list] [network] histone binding  (71 genes)  IEA  
GO:0003682 [list] [network] chromatin binding  (170 genes)  IEA  
GO:0016887 [list] [network] ATP hydrolysis activity  (550 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (2205 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (2559 genes)  IEA  
Protein XP_024464731.1 [sequence] [blastp]
XP_024464732.1 [sequence] [blastp]
XP_024464733.1 [sequence] [blastp]
XP_024464734.1 [sequence] [blastp]
XP_024464735.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  nucl 4  (predict for XP_024464731.1)
cyto 5,  nucl 4  (predict for XP_024464732.1)
nucl 5,  cyto 4  (predict for XP_024464733.1)
nucl 5,  cyto 4  (predict for XP_024464734.1)
cyto 3,  nucl 2,  cyto_pero 2,  cyto_plas 2  (predict for XP_024464735.1)
Subcellular
localization
TargetP
other 7  (predict for XP_024464731.1)
other 7  (predict for XP_024464732.1)
other 7  (predict for XP_024464733.1)
other 7  (predict for XP_024464734.1)
other 8  (predict for XP_024464735.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7467397

.
ppo-r.4
for
7467397

.
ppo-u.5
for
7461648

.
gma-u.5
for
100808039

.
gma-u.5
for
100792398

.
mtr-u.5
for
11425259

.
mtr-u.5
for
11435417

.
ath-u.5
for
CHR5

.
vvi-u.5
for
100261898

.
sly-u.5
for
101252967

.
osa-u.5
for
4344175

.
zma-u.5
for
103647912

.
zma-u.5
for
103633530

.


Ortholog ID: 8383
Species ath gma gma sly osa zma zma bra vvi ppo ppo mtr mtr tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol CHR5 LOC100792398 LOC100808039 LOC101252967 LOC4344175 LOC103633530 LOC103647912 LOC103837640 LOC100261898 LOC7461648 LOC7467397 LOC11435417 LOC11425259 LOC123051727 LOC123424887 LOC107939460 LOC107889299 LOC106410321 LOC106366361 CHLRE_03g179300v5 LOC8072256 LOC102593358 LOC102610451 LOC100826108 LOC107761494 LOC107795803
Function* chromatin remodeling 5 protein CHROMATIN REMODELING 5 protein CHROMATIN REMODELING 5 protein CHROMATIN REMODELING 5 protein CHROMATIN REMODELING 5 protein CHROMATIN REMODELING 5 protein CHROMATIN REMODELING 5 protein CHROMATIN REMODELING 5 protein CHROMATIN REMODELING 5 protein CHROMATIN REMODELING 5 protein CHROMATIN REMODELING 5 protein CHROMATIN REMODELING 5 protein CHROMATIN REMODELING 5 protein CHROMATIN REMODELING 5 protein CHROMATIN REMODELING 5 protein CHROMATIN REMODELING 5 protein CHROMATIN REMODELING 5 protein CHROMATIN REMODELING 5 protein CHROMATIN REMODELING 5 uncharacterized protein protein CHROMATIN REMODELING 5 protein CHROMATIN REMODELING 5 protein CHROMATIN REMODELING 5 protein CHROMATIN REMODELING 5 protein CHROMATIN REMODELING 5-like protein CHROMATIN REMODELING 5
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04120 Ubiquitin mediated proteolysis 3
ath03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03022 Basal transcription factors 2
gma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03013 Nucleocytoplasmic transport 2
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03013 Nucleocytoplasmic transport 3
bra03015 mRNA surveillance pathway 2
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 2
vvi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00310 Lysine degradation 2
ppo03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03018 RNA degradation 4
tae03015 mRNA surveillance pathway 2
tae03020 RNA polymerase 2
tae03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00562 Inositol phosphate metabolism 2
ghi04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03022 Basal transcription factors 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03022 Basal transcription factors 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
sbi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03420 Nucleotide excision repair 2
cit00562 Inositol phosphate metabolism 2
cit04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 4
bdi03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03015 mRNA surveillance pathway 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 815823 100792398 100808039 101252967 4344175 103633530 103647912 103837640 100261898 7461648 7467397 11435417 11425259 123051727 123424887 107939460 107889299 106410321 106366361 5728805 8072256 102593358 102610451 100826108 107761494 107795803
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