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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7467490   photosystem II D1 precursor processing protein PSB27-H2, chloroplastic 
 ppo-r.4   7467490   photosystem II D1 precursor processing protein PSB27-H2, chloroplastic 
 ppo-m.4   7467490   photosystem II D1 precursor processing protein PSB27-H2, chloroplastic 
 gma-u.5   100805317   photosystem II D1 precursor processing protein PSB27-H2, chloroplastic 
 gma-u.5   100797323   photosystem II D1 precursor processing protein PSB27-H2, chloroplastic 
 mtr-u.5   25485214   photosystem II D1 precursor processing protein PSB27-H2, chloroplastic 
 ath-u.5   LPA19   photosystem II 11 kDa protein-like protein 
 vvi-u.5   100259756   photosystem II D1 precursor processing protein PSB27-H2, chloroplastic 
 sly-u.5   101252922   photosystem II D1 precursor processing protein PSB27-H2, chloroplastic 
 osa-u.5   4334100   photosystem II D1 precursor processing protein PSB27-H2, chloroplastic 
 zma-u.5   100276890   photosystem II D1 precursor processing protein PSB27-H2, chloroplastic 

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Top 50 coexpressed genes to 7467490 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7467490 (ppo-u.5 coexpression data)

CoexMap"7467490"


ppoLOC7467490 | Entrez gene ID : 7467490    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 3 2 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0010206 [list] [network] photosystem II repair  (5 genes)  IEA  
GO:0010207 [list] [network] photosystem II assembly  (8 genes)  IEA  
GO CC
GO:0009543 [list] [network] chloroplast thylakoid lumen  (6 genes)  IEA  
GO:0009523 [list] [network] photosystem II  (39 genes)  IEA  
GO MF
Protein XP_002312530.1 [sequence] [blastp]
XP_006379829.1 [sequence] [blastp]
XP_024462022.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  vacu 1  (predict for XP_002312530.1)
chlo 9,  vacu 1  (predict for XP_006379829.1)
chlo 9,  vacu 1  (predict for XP_024462022.1)
Subcellular
localization
TargetP
chlo 6  (predict for XP_002312530.1)
chlo 6  (predict for XP_006379829.1)
chlo 6  (predict for XP_024462022.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7467490

.
ppo-r.4
for
7467490

.
ppo-m.4
for
7467490

.
gma-u.5
for
100805317

.
gma-u.5
for
100797323

.
mtr-u.5
for
25485214

.
ath-u.5
for
LPA19

.
vvi-u.5
for
100259756

.
sly-u.5
for
101252922

.
osa-u.5
for
4334100

.
zma-u.5
for
100276890

.


Ortholog ID: 10426
Species ath gma gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol LPA19 LOC100797323 LOC100805317 LOC101252922 LOC4334100 LOC100276890 LOC103854582 LOC100259756 LOC7467490 LOC25485214 LOC123113304 LOC123122814 LOC123452216 LOC107896634 LOC121208457 LOC111206227 LOC106371195 CHLRE_02g073850v5 LOC8060474 LOC102580023 LOC102627996 LOC100826702 LOC107814208 LOC107791047
Function* photosystem II 11 kDa protein-like protein photosystem II D1 precursor processing protein PSB27-H2, chloroplastic photosystem II D1 precursor processing protein PSB27-H2, chloroplastic photosystem II D1 precursor processing protein PSB27-H2, chloroplastic photosystem II D1 precursor processing protein PSB27-H2, chloroplastic photosystem II D1 precursor processing protein PSB27-H2, chloroplastic photosystem II D1 precursor processing protein PSB27-H2, chloroplastic photosystem II D1 precursor processing protein PSB27-H2, chloroplastic photosystem II D1 precursor processing protein PSB27-H2, chloroplastic photosystem II D1 precursor processing protein PSB27-H2, chloroplastic photosystem II D1 precursor processing protein PSB27-H2, chloroplastic photosystem II D1 precursor processing protein PSB27-H2, chloroplastic photosystem II D1 precursor processing protein PSB27-H2, chloroplastic photosystem II D1 precursor processing protein PSB27-H2, chloroplastic photosystem II D1 precursor processing protein PSB27-H2, chloroplastic photosystem II D1 precursor processing protein PSB27-H2, chloroplastic photosystem II D1 precursor processing protein PSB27-H2, chloroplastic uncharacterized protein photosystem II D1 precursor processing protein PSB27-H2, chloroplastic photosystem II D1 precursor processing protein PSB27-H2, chloroplastic photosystem II D1 precursor processing protein PSB27-H2, chloroplastic photosystem II D1 precursor processing protein PSB27-H2, chloroplastic photosystem II D1 precursor processing protein PSB27-H2, chloroplastic photosystem II D1 precursor processing protein PSB27-H2, chloroplastic-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 4
ath01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00195 Photosynthesis 2
gma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 3
ghi00380 Tryptophan metabolism 2
ghi00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 3
ghi00380 Tryptophan metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 6
nta00450 Selenocompound metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 6
nta00450 Selenocompound metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 837040 100797323 100805317 101252922 4334100 100276890 103854582 100259756 7467490 25485214 123113304 123122814 123452216 107896634 121208457 111206227 106371195 5727167 8060474 102580023 102627996 100826702 107814208 107791047
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