Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7467601   mediator of RNA polymerase II transcription subunit 4 
 ppo-r.4   7467601   mediator of RNA polymerase II transcription subunit 4 
 ppo-m.4   7467601   mediator of RNA polymerase II transcription subunit 4 
 gma-u.5   100812941   mediator of RNA polymerase II transcription subunit 4 
 gma-u.5   100812071   mediator of RNA polymerase II transcription subunit 4 
 gma-u.5   100796958   mediator of RNA polymerase II transcription subunit 4 
 mtr-u.5   11426971   mediator of RNA polymerase II transcription subunit 4 
 mtr-u.5   11438689   mediator of RNA polymerase II transcription subunit 4 
 ath-u.5   AT5G02850   hydroxyproline-rich glycoprotein family protein 
 vvi-u.5   100249946   mediator of RNA polymerase II transcription subunit 4 
 sly-u.5   101246818   mediator of RNA polymerase II transcription subunit 4 
 sly-u.5   101244543   mediator of RNA polymerase II transcription subunit 4 
 osa-u.5   4347726   mediator of RNA polymerase II transcription subunit 4 
 zma-u.5   100277397   Mediator of RNA polymerase II transcription subunit 4 

close


Top 50 coexpressed genes to 7467601 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 7467601 (ppo-u.5 coexpression data)

CoexMap"7467601"


ppoLOC7467601 | Entrez gene ID : 7467601    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 3 3 2 1 1 2 1 1 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006357 [list] [network] regulation of transcription by RNA polymerase II  (481 genes)  IEA  
GO CC
GO:0070847 [list] [network] core mediator complex  (8 genes)  IEA  
GO:0016592 [list] [network] mediator complex  (44 genes)  IEA  
GO MF
GO:0003712 [list] [network] transcription coregulator activity  (154 genes)  IEA  
Protein XP_024443629.1 [sequence] [blastp]
XP_024443630.1 [sequence] [blastp]
XP_024443634.1 [sequence] [blastp]
XP_052304011.1 [sequence] [blastp]
XP_052304012.1 [sequence] [blastp]
XP_052304013.1 [sequence] [blastp]
XP_052304014.1 [sequence] [blastp]
XP_052304015.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  nucl 4  (predict for XP_024443629.1)
chlo 6,  nucl 4  (predict for XP_024443630.1)
chlo 6,  nucl 4  (predict for XP_024443634.1)
chlo 6,  nucl 4  (predict for XP_052304011.1)
chlo 6,  nucl 4  (predict for XP_052304012.1)
chlo 6,  nucl 4  (predict for XP_052304013.1)
chlo 6,  nucl 4  (predict for XP_052304014.1)
chlo 6,  nucl 4  (predict for XP_052304015.1)
Subcellular
localization
TargetP
chlo 6  (predict for XP_024443629.1)
chlo 6  (predict for XP_024443630.1)
chlo 6  (predict for XP_024443634.1)
chlo 6  (predict for XP_052304011.1)
chlo 6  (predict for XP_052304012.1)
chlo 6  (predict for XP_052304013.1)
chlo 6  (predict for XP_052304014.1)
chlo 6  (predict for XP_052304015.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7467601

.
ppo-r.4
for
7467601

.
ppo-m.4
for
7467601

.
gma-u.5
for
100812941

.
gma-u.5
for
100812071

.
gma-u.5
for
100796958

.
mtr-u.5
for
11426971

.
mtr-u.5
for
11438689

.
ath-u.5
for
AT5G02850

.
vvi-u.5
for
100249946

.
sly-u.5
for
101246818

.
sly-u.5
for
101244543

.
osa-u.5
for
4347726

.
zma-u.5
for
100277397

.


Ortholog ID: 7337
Species ath gma gma sly sly osa zma bra vvi ppo mtr mtr tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol AT5G02850 LOC100796958 LOC100812071 LOC101246818 LOC101244543 LOC4347726 LOC100277397 LOC103847418 LOC100249946 LOC7467601 LOC11438689 LOC11426971 LOC123104622 LOC123112891 LOC123400179 LOC107886154 LOC107949715 LOC106372609 LOC106450523 LOC8067287 LOC102580997 LOC102619807 LOC100835981 LOC107829302 LOC107814746
Function* hydroxyproline-rich glycoprotein family protein mediator of RNA polymerase II transcription subunit 4 mediator of RNA polymerase II transcription subunit 4 mediator of RNA polymerase II transcription subunit 4 mediator of RNA polymerase II transcription subunit 4 mediator of RNA polymerase II transcription subunit 4 Mediator of RNA polymerase II transcription subunit 4 mediator of RNA polymerase II transcription subunit 4 mediator of RNA polymerase II transcription subunit 4 mediator of RNA polymerase II transcription subunit 4 mediator of RNA polymerase II transcription subunit 4 mediator of RNA polymerase II transcription subunit 4 mediator of RNA polymerase II transcription subunit 4 mediator of RNA polymerase II transcription subunit 4 mediator of RNA polymerase II transcription subunit 4 mediator of RNA polymerase II transcription subunit 4 mediator of RNA polymerase II transcription subunit 4 mediator of RNA polymerase II transcription subunit 4 mediator of RNA polymerase II transcription subunit 4-like mediator of RNA polymerase II transcription subunit 4 mediator of RNA polymerase II transcription subunit 4 mediator of RNA polymerase II transcription subunit 4 mediator of RNA polymerase II transcription subunit 4 mediator of RNA polymerase II transcription subunit 4-like mediator of RNA polymerase II transcription subunit 4-like
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 5
ath03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 6
zma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04141 Protein processing in endoplasmic reticulum 3
vvi03015 mRNA surveillance pathway 2
vvi04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03050 Proteasome 3
mtr03040 Spliceosome 2
mtr04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03410 Base excision repair 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03410 Base excision repair 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 4
sbi03050 Proteasome 3
sbi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03015 mRNA surveillance pathway 2
sot04382 Cornified envelope formation 2
sot03018 RNA degradation 2
sot03250 Viral life cycle - HIV-1 2
sot03272 Virion - Hepatitis viruses 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 5
bdi00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03410 Base excision repair 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 831762 100796958 100812071 101246818 101244543 4347726 100277397 103847418 100249946 7467601 11438689 11426971 123104622 123112891 123400179 107886154 107949715 106372609 106450523 8067287 102580997 102619807 100835981 107829302 107814746
The preparation time of this page was 0.1 [sec].