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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7467622   citrate synthase, glyoxysomal 
 ppo-r.4   7467622   citrate synthase, glyoxysomal 
 ppo-m.4   7467622   citrate synthase, glyoxysomal 
 ppo-u.5   7466294   citrate synthase, glyoxysomal 
 gma-u.5   100805556   citrate synthase, glyoxysomal 
 gma-u.5   100784332   citrate synthase, glyoxysomal 
 gma-u.5   100775180   citrate synthase, glyoxysomal 
 mtr-u.5   11437065   citrate synthase, glyoxysomal 
 mtr-u.5   11445289   citrate synthase, glyoxysomal 
 ath-u.5   CSY3   citrate synthase 3 
 ath-u.5   CSY2   citrate synthase 2 
 vvi-u.5   100255795   citrate synthase-like 
 sly-u.5   101260902   citrate synthase, glyoxysomal 
 sly-u.5   101258079   citrate synthase 3, peroxisomal-like 
 osa-u.5   4328812   citrate synthase 3, peroxisomal 
 zma-u.5   100275174   uncharacterized LOC100275174 

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Top 50 coexpressed genes to 7467622 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7467622 (ppo-u.5 coexpression data)

CoexMap"7467622"


ppoLOC7467622 | Entrez gene ID : 7467622    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 4 3 2 2 1 2 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG pop00020 [list] [network] Citrate cycle (TCA cycle) (73 genes)
pop00630 [list] [network] Glyoxylate and dicarboxylate metabolism (100 genes)
pop01200 [list] [network] Carbon metabolism (347 genes)
pop01210 [list] [network] 2-Oxocarboxylic acid metabolism (97 genes)
pop01230 [list] [network] Biosynthesis of amino acids (287 genes)
GO BP
GO:0006099 [list] [network] tricarboxylic acid cycle  (61 genes)  IEA  
GO:0005975 [list] [network] carbohydrate metabolic process  (863 genes)  IEA  
GO CC
GO:0005759 [list] [network] mitochondrial matrix  (86 genes)  IEA  
GO MF
Protein XP_002322875.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  chlo 1,  pero 1,  mito 1,  extr 1  (predict for XP_002322875.1)
Subcellular
localization
TargetP
other 3,  scret 3  (predict for XP_002322875.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7467622

.
ppo-r.4
for
7467622

.
ppo-m.4
for
7467622

.
ppo-u.5
for
7466294

.
gma-u.5
for
100805556

.
gma-u.5
for
100784332

.
gma-u.5
for
100775180

.
mtr-u.5
for
11437065

.
mtr-u.5
for
11445289

.
ath-u.5
for
CSY3

.
ath-u.5
for
CSY2

.
vvi-u.5
for
100255795

.
sly-u.5
for
101260902

.
sly-u.5
for
101258079

.
osa-u.5
for
4328812

.
zma-u.5
for
100275174

.


Ortholog ID: 4367
Species ath gma gma sly sly osa zma bra bra vvi ppo ppo mtr mtr tae tae hvu ghi ghi bna bna cre sbi sot sot cit bdi nta nta
Symbol CSY3 LOC100775180 LOC100805556 LOC101258079 LOC101260902 LOC4328812 LOC100275174 LOC103866666 LOC103830182 LOC100255795 LOC7466294 LOC7467622 LOC11437065 LOC11445289 LOC123113497 LOC123123023 LOC123452492 LOC107911708 LOC107924402 LOC106353174 LOC106368301 CHLRE_03g149100v5 LOC8073811 LOC102595659 LOC102594559 LOC102629069 LOC100838601 LOC107822424 LOC107815303
Function* citrate synthase 3 citrate synthase, glyoxysomal citrate synthase, glyoxysomal citrate synthase 3, peroxisomal-like citrate synthase, glyoxysomal citrate synthase 3, peroxisomal uncharacterized LOC100275174 citrate synthase 3, peroxisomal citrate synthase 2, peroxisomal citrate synthase-like citrate synthase, glyoxysomal citrate synthase, glyoxysomal citrate synthase, glyoxysomal citrate synthase, glyoxysomal citrate synthase 3, peroxisomal citrate synthase 3, peroxisomal citrate synthase, glyoxysomal-like citrate synthase 2, peroxisomal citrate synthase 2, peroxisomal citrate synthase 2, peroxisomal-like citrate synthase 2, peroxisomal uncharacterized protein citrate synthase, glyoxysomal citrate synthase, glyoxysomal citrate synthase 3, peroxisomal-like citrate synthase, glyoxysomal citrate synthase, glyoxysomal citrate synthase, glyoxysomal-like citrate synthase, glyoxysomal
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00071 Fatty acid degradation 4
ath01212 Fatty acid metabolism 4
ath04142 Lysosome 4
ath00592 alpha-Linolenic acid metabolism 3
ath01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01200 Carbon metabolism 3
gma01230 Biosynthesis of amino acids 3
gma00020 Citrate cycle (TCA cycle) 2
gma00630 Glyoxylate and dicarboxylate metabolism 2
gma01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01200 Carbon metabolism 5
gma00071 Fatty acid degradation 3
gma00410 beta-Alanine metabolism 3
gma00592 alpha-Linolenic acid metabolism 3
gma00640 Propanoate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04120 Ubiquitin mediated proteolysis 3
sly03083 Polycomb repressive complex 2
sly04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04136 Autophagy - other 3
sly00600 Sphingolipid metabolism 2
sly03060 Protein export 2
sly04141 Protein processing in endoplasmic reticulum 2
sly04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00071 Fatty acid degradation 6
osa01200 Carbon metabolism 6
osa00280 Valine, leucine and isoleucine degradation 4
osa00592 alpha-Linolenic acid metabolism 4
osa01212 Fatty acid metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00071 Fatty acid degradation 3
zma01212 Fatty acid metabolism 3
zma00630 Glyoxylate and dicarboxylate metabolism 3
zma01200 Carbon metabolism 3
zma04146 Peroxisome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00592 alpha-Linolenic acid metabolism 3
bra00071 Fatty acid degradation 3
bra00280 Valine, leucine and isoleucine degradation 3
bra00561 Glycerolipid metabolism 2
bra00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03015 mRNA surveillance pathway 2
bra04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01200 Carbon metabolism 6
ppo04146 Peroxisome 4
ppo01230 Biosynthesis of amino acids 4
ppo00071 Fatty acid degradation 3
ppo00280 Valine, leucine and isoleucine degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01200 Carbon metabolism 4
ppo00280 Valine, leucine and isoleucine degradation 3
ppo00052 Galactose metabolism 3
ppo00071 Fatty acid degradation 2
ppo00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00280 Valine, leucine and isoleucine degradation 6
mtr01200 Carbon metabolism 5
mtr00071 Fatty acid degradation 4
mtr00410 beta-Alanine metabolism 4
mtr00592 alpha-Linolenic acid metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01200 Carbon metabolism 6
mtr00410 beta-Alanine metabolism 6
mtr00280 Valine, leucine and isoleucine degradation 5
mtr00071 Fatty acid degradation 5
mtr00640 Propanoate metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04626 Plant-pathogen interaction 2
tae04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00071 Fatty acid degradation 5
tae00592 alpha-Linolenic acid metabolism 5
tae01212 Fatty acid metabolism 5
tae01200 Carbon metabolism 5
tae00330 Arginine and proline metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01200 Carbon metabolism 4
hvu00071 Fatty acid degradation 3
hvu01212 Fatty acid metabolism 3
hvu00592 alpha-Linolenic acid metabolism 2
hvu00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00630 Glyoxylate and dicarboxylate metabolism 5
ghi01200 Carbon metabolism 4
ghi01230 Biosynthesis of amino acids 3
ghi00020 Citrate cycle (TCA cycle) 2
ghi01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00630 Glyoxylate and dicarboxylate metabolism 5
ghi01200 Carbon metabolism 4
ghi01230 Biosynthesis of amino acids 3
ghi00020 Citrate cycle (TCA cycle) 2
ghi01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00020 Citrate cycle (TCA cycle) 9
bna00630 Glyoxylate and dicarboxylate metabolism 9
bna01200 Carbon metabolism 9
bna01210 2-Oxocarboxylic acid metabolism 9
bna01230 Biosynthesis of amino acids 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00020 Citrate cycle (TCA cycle) 9
bna00630 Glyoxylate and dicarboxylate metabolism 9
bna01200 Carbon metabolism 9
bna01210 2-Oxocarboxylic acid metabolism 9
bna01230 Biosynthesis of amino acids 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01200 Carbon metabolism 6
cre00010 Glycolysis / Gluconeogenesis 3
cre00620 Pyruvate metabolism 3
cre00630 Glyoxylate and dicarboxylate metabolism 3
cre00640 Propanoate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00280 Valine, leucine and isoleucine degradation 5
sbi00020 Citrate cycle (TCA cycle) 3
sbi01200 Carbon metabolism 3
sbi01212 Fatty acid metabolism 3
sbi00071 Fatty acid degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01200 Carbon metabolism 8
sot00071 Fatty acid degradation 6
sot00592 alpha-Linolenic acid metabolism 6
sot01212 Fatty acid metabolism 6
sot01040 Biosynthesis of unsaturated fatty acids 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01200 Carbon metabolism 4
sot00630 Glyoxylate and dicarboxylate metabolism 3
sot03040 Spliceosome 2
sot03060 Protein export 2
sot04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01200 Carbon metabolism 8
cit01230 Biosynthesis of amino acids 5
cit00500 Starch and sucrose metabolism 3
cit01210 2-Oxocarboxylic acid metabolism 3
cit00020 Citrate cycle (TCA cycle) 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00071 Fatty acid degradation 6
bdi01212 Fatty acid metabolism 6
bdi00592 alpha-Linolenic acid metabolism 5
bdi00410 beta-Alanine metabolism 4
bdi04146 Peroxisome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00071 Fatty acid degradation 5
nta01212 Fatty acid metabolism 5
nta01200 Carbon metabolism 5
nta00280 Valine, leucine and isoleucine degradation 4
nta01230 Biosynthesis of amino acids 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00071 Fatty acid degradation 5
nta01212 Fatty acid metabolism 5
nta01200 Carbon metabolism 5
nta00280 Valine, leucine and isoleucine degradation 4
nta01230 Biosynthesis of amino acids 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 818879 100775180 100805556 101258079 101260902 4328812 100275174 103866666 103830182 100255795 7466294 7467622 11437065 11445289 123113497 123123023 123452492 107911708 107924402 106353174 106368301 5721175 8073811 102595659 102594559 102629069 100838601 107822424 107815303
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