ATTED-II : GeneCoexpression result

Species	Gene	Description
ppo-u.5	7468106	probable protein phosphatase 2C 42
ppo-r.4	7468106	probable protein phosphatase 2C 42
ppo-m.4	7468106	probable protein phosphatase 2C 42
ppo-u.5	7485895	probable protein phosphatase 2C 42
gma-u.5	100814799	probable protein phosphatase 2C 42
gma-u.5	100813333	probable protein phosphatase 2C 42
gma-u.5	100790813	probable protein phosphatase 2C 42
mtr-u.5	11417468	probable protein phosphatase 2C 42
ath-u.5	AT3G17090	Protein phosphatase 2C family protein
vvi-u.5	100241379	probable protein phosphatase 2C 42
sly-u.5	101264636	probable protein phosphatase 2C 42
osa-u.5	4334678	Probable protein phosphatase 2C 36
zma-u.5	100283350	uncharacterized LOC100283350

functional annotation

KEGG

GO BP

GO:0006470 [list] [network] protein dephosphorylation

(162 genes)

IEA

GO CC

GO MF

GO:0004722 [list] [network] protein serine/threonine phosphatase activity	(140 genes)	IEA
GO:0043169 [list] [network] cation binding	(2211 genes)	IEA

Protein

XP_002314955.2 [sequence] [blastp]
XP_024465461.1 [sequence] [blastp]
XP_024465462.1 [sequence] [blastp]
XP_052312719.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 5, cyto 1, nucl 1, mito 1, vacu 1, E.R. 1, pero 1, E.R._vacu 1, cyto_plas 1	(predict for XP_002314955.2)
chlo 5, cyto 1, nucl 1, mito 1, vacu 1, E.R. 1, pero 1, E.R._vacu 1, cyto_plas 1	(predict for XP_024465461.1)
cyto 3, nucl 1, plas 1, cysk 1, cysk_nucl 1, nucl_plas 1, E.R._vacu 1, cyto_pero 1, cysk_plas 1	(predict for XP_024465462.1)
chlo 6, nucl 1, cyto 1, mito 1, vacu 1, E.R. 1, pero 1, cyto_nucl 1, E.R._vacu 1, cyto_pero 1, cyto_E.R. 1	(predict for XP_052312719.1)

Subcellular
localization
TargetP

mito 3	(predict for XP_002314955.2)
mito 3	(predict for XP_024465461.1)
other 9, scret 3	(predict for XP_024465462.1)
mito 3	(predict for XP_052312719.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ppo-u.5 for 7468106	ppo-r.4 for 7468106	ppo-m.4 for 7468106	ppo-u.5 for 7485895	gma-u.5 for 100814799	gma-u.5 for 100813333	gma-u.5 for 100790813	mtr-u.5 for 11417468	ath-u.5 for AT3G17090	vvi-u.5 for 100241379	sly-u.5 for 101264636	osa-u.5 for 4334678	zma-u.5 for 100283350

Ortholog ID: 7571

Species

ppo

gma

mtr

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

Symbol

Function^*

probable protein phosphatase 2C 42

Protein phosphatase 2C family protein

probable protein phosphatase 2C 42

putative protein phosphatase 2C 42

Probable protein phosphatase 2C 36

uncharacterized LOC100283350

probable protein phosphatase 2C 36

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00040	Pentose and glucuronate interconversions	2
ppo04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00040	Pentose and glucuronate interconversions	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04141	Protein processing in endoplasmic reticulum	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04626	Plant-pathogen interaction	2
mtr04075	Plant hormone signal transduction	2
mtr04130	SNARE interactions in vesicular transport	2
mtr03050	Proteasome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03008	Ribosome biogenesis in eukaryotes	2
ath04712	Circadian rhythm - plant	2
ath04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04144	Endocytosis	5
bra05100	Bacterial invasion of epithelial cells	3
bra04141	Protein processing in endoplasmic reticulum	2
bra04142	Lysosome	2
bra04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00541	Biosynthesis of various nucleotide sugars	3
vvi01250	Biosynthesis of nucleotide sugars	3
vvi00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03040	Spliceosome	4
bna03015	mRNA surveillance pathway	3
bna00520	Amino sugar and nucleotide sugar metabolism	2
bna01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot01250	Biosynthesis of nucleotide sugars	3
sot03015	mRNA surveillance pathway	3
sot00053	Ascorbate and aldarate metabolism	2
sot00520	Amino sugar and nucleotide sugar metabolism	2
sot01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04075	Plant hormone signal transduction	10
nta00960	Tropane, piperidine and pyridine alkaloid biosynthesis	2
nta00905	Brassinosteroid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04075	Plant hormone signal transduction	10
nta00905	Brassinosteroid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03030	DNA replication	6
osa03430	Mismatch repair	3
osa03440	Homologous recombination	3
osa03410	Base excision repair	2
osa03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00020	Citrate cycle (TCA cycle)	3
zma00785	Lipoic acid metabolism	3
zma01200	Carbon metabolism	3
zma01210	2-Oxocarboxylic acid metabolism	3
zma00310	Lysine degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu01200	Carbon metabolism	6
hvu00020	Citrate cycle (TCA cycle)	5
hvu01210	2-Oxocarboxylic acid metabolism	4
hvu00010	Glycolysis / Gluconeogenesis	4
hvu00620	Pyruvate metabolism	3

Expression

Expression pattern

Entrez Gene ID^*

7468106

7485895

100813333

100790813

11417468

820966

103839570

100241379

107896598

107915085

125580451

106439592

102616436

101264636

102581887

107818592

107794528

4334678

100283350

123114126

123123612

123453189

8080206

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 7468106 (ppo-u.5 coexpression data)

Top 50 enrichment test to 7468106 (ppo-u.5 coexpression data)


Species	ppo	gma	mtr	ath	vvi	sly	osa	zma	bdi	hvu	bra	cit	bna	sbi	ghi	sot	nta	cre	tae
Paralog	4	3	1	1	1	1	1	1	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 7468106 (ppo-u.5 coexpression data)

Top 50 enrichment test to 7468106 (ppo-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**