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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7468375   uncharacterized LOC7468375 
 ppo-r.4   7468375   uncharacterized LOC7468375 
 ppo-u.5   18107430   uncharacterized LOC18107430 
 gma-u.5   100792187   ecotropic viral integration site 5 protein homolog 
 gma-u.5   100778662   Rab-GTPase-TBC domain-containing protein 
 mtr-u.5   25495518   EVI5-like protein 
 ath-u.5   AT3G02460   Ypt/Rab-GAP domain of gyp1p superfamily protein 
 ath-u.5   PAM1   plant adhesion molecule 1 
 vvi-u.5   100260077   uncharacterized LOC100260077 
 sly-u.5   101262565   putative plant adhesion protein 
 osa-u.5   4345560   uncharacterized LOC4345560 
 zma-u.5   100272252   USP6-like protein 

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Top 50 coexpressed genes to 7468375 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7468375 (ppo-u.5 coexpression data)

CoexMap"7468375"


ppoLOC7468375 | Entrez gene ID : 7468375    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 3 2 1 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
Protein XP_002305293.2 [sequence] [blastp]
XP_024455962.1 [sequence] [blastp]
XP_024455963.1 [sequence] [blastp]
XP_024455964.1 [sequence] [blastp]
XP_024455965.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 8,  nucl 1,  E.R. 1,  pero 1  (predict for XP_002305293.2)
cyto 8,  nucl 1,  E.R. 1,  pero 1  (predict for XP_024455962.1)
cyto 8,  nucl 1,  E.R. 1,  pero 1  (predict for XP_024455963.1)
cyto 8,  nucl 1,  plas 1,  pero 1,  nucl_plas 1  (predict for XP_024455964.1)
nucl 6,  cyto 3,  cysk_nucl 3,  nucl_plas 3  (predict for XP_024455965.1)
Subcellular
localization
TargetP
other 9  (predict for XP_002305293.2)
other 9  (predict for XP_024455962.1)
other 9  (predict for XP_024455963.1)
other 9  (predict for XP_024455964.1)
other 8  (predict for XP_024455965.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7468375

.
ppo-r.4
for
7468375

.
ppo-u.5
for
18107430

.
gma-u.5
for
100792187

.
gma-u.5
for
100778662

.
mtr-u.5
for
25495518

.
ath-u.5
for
AT3G02460

.
ath-u.5
for
PAM1

.
vvi-u.5
for
100260077

.
sly-u.5
for
101262565

.
osa-u.5
for
4345560

.
zma-u.5
for
100272252

.


Ortholog ID: 7579
Species ath ath gma gma sly osa zma bra bra vvi ppo ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi bdi nta nta
Symbol AT3G02460 PAM1 LOC100792187 LOC100778662 LOC101262565 LOC4345560 LOC100272252 LOC103851015 LOC103858958 LOC100260077 LOC18107430 LOC7468375 LOC25495518 LOC123090723 LOC123087236 LOC123447208 LOC107930507 LOC107916727 LOC106438932 LOC125582120 CHLRE_17g727450v5 LOC8081217 LOC102586750 LOC102607554 LOC100846928 LOC100839878 LOC107761476 LOC107812048
Function* Ypt/Rab-GAP domain of gyp1p superfamily protein plant adhesion molecule 1 ecotropic viral integration site 5 protein homolog Rab-GTPase-TBC domain-containing protein putative plant adhesion protein uncharacterized LOC4345560 USP6-like protein TBC1 domain family member 10B ecotropic viral integration site 5 protein homolog uncharacterized LOC100260077 uncharacterized LOC18107430 uncharacterized LOC7468375 EVI5-like protein EVI5-like protein EVI5-like protein ecotropic viral integration site 5 protein homolog EVI5-like protein EVI5-like protein ecotropic viral integration site 5 protein homolog TBC1 domain family member 10B-like uncharacterized protein EVI5-like protein EVI5-like protein uncharacterized LOC102607554 ecotropic viral integration site 5 protein homolog TBC1 domain family member 10A uncharacterized LOC107761476 uncharacterized LOC107812048
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03015 mRNA surveillance pathway 2
ath04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 2
sly04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04142 Lysosome 4
bra04144 Endocytosis 4
bra05100 Bacterial invasion of epithelial cells 3
bra03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 2
bra04712 Circadian rhythm - plant 2
bra03083 Polycomb repressive complex 2
bra03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00600 Sphingolipid metabolism 2
ghi04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00600 Sphingolipid metabolism 2
ghi04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03015 mRNA surveillance pathway 4
bna04382 Cornified envelope formation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00562 Inositol phosphate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00240 Pyrimidine metabolism 2
bdi01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00564 Glycerophospholipid metabolism 2
nta00562 Inositol phosphate metabolism 2
nta04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00564 Glycerophospholipid metabolism 2
nta04130 SNARE interactions in vesicular transport 2
nta00562 Inositol phosphate metabolism 2
nta04070 Phosphatidylinositol signaling system 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 821261 831450 100792187 100778662 101262565 4345560 100272252 103851015 103858958 100260077 18107430 7468375 25495518 123090723 123087236 123447208 107930507 107916727 106438932 125582120 5722808 8081217 102586750 102607554 100846928 100839878 107761476 107812048
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