ATTED-II : GeneCoexpression result

Species	Gene	Description
ppo-u.5	7468582	laccase-4
ppo-r.4	7468582	laccase-4
ppo-u.5	7494473	laccase-4
ppo-u.5	7478550	laccase-4
ppo-u.5	7457267	laccase-4
gma-u.5	100806257	laccase-4
gma-u.5	100779825	laccase-4
gma-u.5	100782018	laccase-4
mtr-u.5	11406707	laccase-4
mtr-u.5	25490798	laccase-4
mtr-u.5	11419201	laccase-4
ath-u.5	IRX12	Laccase/Diphenol oxidase family protein
ath-u.5	LAC10	laccase 10
vvi-u.5	100267265	laccase-4
vvi-u.5	100247392	laccase-4
vvi-u.5	100240808	laccase-4
sly-u.5	101253311	laccase-4
sly-u.5	101251829	laccase-4-like
osa-u.5	9269875	laccase-22-like

Annotation

functional annotation

KEGG

GO BP

GO:0046274 [list] [network] lignin catabolic process

(41 genes)

IEA

GO CC

GO:0048046 [list] [network] apoplast

(92 genes)

IEA

GO MF

GO:0052716 [list] [network] hydroquinone:oxygen oxidoreductase activity	(41 genes)	IEA
GO:0005507 [list] [network] copper ion binding	(101 genes)	IEA

Protein

XP_002314124.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 6, vacu 3, chlo_mito 3

(predict for XP_002314124.1)

Subcellular
localization
TargetP

scret 9

(predict for XP_002314124.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ppo-u.5 for 7468582	ppo-r.4 for 7468582	ppo-u.5 for 7494473	ppo-u.5 for 7478550	ppo-u.5 for 7457267	gma-u.5 for 100806257	gma-u.5 for 100779825	gma-u.5 for 100782018	mtr-u.5 for 11406707	mtr-u.5 for 25490798	mtr-u.5 for 11419201	ath-u.5 for IRX12	ath-u.5 for LAC10	vvi-u.5 for 100267265	vvi-u.5 for 100247392	vvi-u.5 for 100240808	sly-u.5 for 101253311	sly-u.5 for 101251829	osa-u.5 for 9269875

Ortholog

Ortholog ID: 1494

Species

ppo

gma

mtr

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

hvu

bdi

Symbol

LAC10

Function^*

laccase-4

laccase 10

laccase-4

laccase-22

laccase-4-like

laccase-22

laccase-4

laccase-4-like

laccase-22-like

laccase-4

laccase-22-like

laccase-22

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04145	Phagosome	2
gma04148	Efferocytosis	2
gma04517	IgSF CAM signaling	2
gma04518	Integrin signaling	2
gma04620	Toll-like receptor signaling pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00564	Glycerophospholipid metabolism	2
ghi00052	Galactose metabolism	2
ghi00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00380	Tryptophan metabolism	2
nta04075	Plant hormone signal transduction	2
nta00071	Fatty acid degradation	2
nta00073	Cutin, suberine and wax biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00380	Tryptophan metabolism	2
hvu00010	Glycolysis / Gluconeogenesis	2
hvu01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00010	Glycolysis / Gluconeogenesis	2
bdi00071	Fatty acid degradation	2
bdi00350	Tyrosine metabolism	2
bdi00620	Pyruvate metabolism	2
bdi01200	Carbon metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

7468043

7478550

100786722

100779825

11419201

25490798

831697

103867139

103865649

100267265

100247392

107960103

106447656

106345514

102610433

102620940

101250647

102588474

102583122

107802428

107811434

9269875

123448225

100837611

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 7468582 (ppo-u.5 coexpression data)

Top 50 enrichment test to 7468582 (ppo-u.5 coexpression data)


Species	ppo	gma	mtr	ath	vvi	sly	osa	bdi	hvu	bra	cit	bna	sbi	ghi	sot	nta	cre	tae	zma
Paralog	5	3	3	2	3	2	1	0	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 7468582 (ppo-u.5 coexpression data)

Top 50 enrichment test to 7468582 (ppo-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**