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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7470771   probable pectin methylesterase CGR3 
 ppo-r.4   7470771   probable pectin methylesterase CGR3 
 ppo-m.4   7470771   probable pectin methylesterase CGR3 
 ppo-u.5   7469664   probable pectin methylesterase CGR2 
 gma-u.5   100800870   uncharacterized LOC100800870 
 gma-u.5   100796049   uncharacterized LOC100796049 
 gma-u.5   100791487   uncharacterized LOC100791487 
 mtr-u.5   25482029   probable pectin methylesterase CGR2 
 mtr-u.5   11431552   probable pectin methylesterase CGR2 
 ath-u.5   AT3G49720   uncharacterized protein 
 ath-u.5   CGR3   uncharacterized protein 
 vvi-u.5   100255908   probable pectin methylesterase CGR2 
 vvi-u.5   100244559   probable pectin methylesterase CGR2 
 vvi-u.5   100243785   probable pectin methylesterase CGR3 
 sly-u.5   101256717   probable pectin methylesterase CGR3 
 sly-u.5   101249725   probable pectin methylesterase CGR3 
 sly-u.5   101265077   probable pectin methylesterase CGR3 
 osa-u.5   4325464   probable pectin methylesterase CGR2 
 zma-u.5   100272653   uncharacterized LOC100272653 
 zma-u.5   100276063   uncharacterized LOC100276063 

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Top 50 coexpressed genes to 7470771 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7470771 (ppo-u.5 coexpression data)

CoexMap"7470771"


ppoLOC7470771 | Entrez gene ID : 7470771    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 4 3 2 2 3 3 1 2 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0045488 [list] [network] pectin metabolic process  (7 genes)  IEA  
GO CC
GO MF
GO:0008168 [list] [network] methyltransferase activity  (319 genes)  IEA  
Protein XP_002300295.1 [sequence] [blastp]
XP_006369709.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  mito 4,  plas 1,  vacu 1  (predict for XP_002300295.1)
chlo 5,  mito 4,  plas 1,  vacu 1  (predict for XP_006369709.1)
Subcellular
localization
TargetP
mito 6  (predict for XP_002300295.1)
mito 6  (predict for XP_006369709.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7470771

.
ppo-r.4
for
7470771

.
ppo-m.4
for
7470771

.
ppo-u.5
for
7469664

.
gma-u.5
for
100800870

.
gma-u.5
for
100796049

.
gma-u.5
for
100791487

.
mtr-u.5
for
25482029

.
mtr-u.5
for
11431552

.
ath-u.5
for
AT3G49720

.
ath-u.5
for
CGR3

.
vvi-u.5
for
100255908

.
vvi-u.5
for
100244559

.
vvi-u.5
for
100243785

.
sly-u.5
for
101256717

.
sly-u.5
for
101249725

.
sly-u.5
for
101265077

.
osa-u.5
for
4325464

.
zma-u.5
for
100272653

.
zma-u.5
for
100276063

.


Ortholog ID: 1983
Species ath ath gma gma sly sly osa zma zma bra bra vvi vvi ppo ppo mtr tae tae hvu ghi ghi bna bna sbi sot sot cit cit bdi nta nta
Symbol AT3G49720 CGR3 LOC100805476 LOC100778341 LOC101256717 LOC101245514 LOC4325464 LOC100272653 LOC100276063 LOC103873032 LOC103875453 LOC100243785 LOC100244559 LOC7469664 LOC7470771 LOC25482029 LOC123060057 LOC123068534 LOC123442638 LOC107935263 LOC107935264 LOC106360577 BNAA09G07220D LOC8073315 LOC102583825 LOC102578463 LOC102624811 LOC102615263 LOC100827884 LOC107828760 LOC107768381
Function* uncharacterized protein uncharacterized protein probable pectin methylesterase CGR3 uncharacterized LOC100778341 probable pectin methylesterase CGR3 probable pectin methylesterase CGR2 probable pectin methylesterase CGR2 uncharacterized LOC100272653 uncharacterized LOC100276063 probable pectin methylesterase CGR2 probable pectin methylesterase CGR2 probable pectin methylesterase CGR3 probable pectin methylesterase CGR2 probable pectin methylesterase CGR2 probable pectin methylesterase CGR3 probable pectin methylesterase CGR2 probable pectin methylesterase CGR2 probable pectin methylesterase CGR2 probable pectin methylesterase CGR2 probable pectin methylesterase CGR2 probable pectin methylesterase CGR2 probable pectin methylesterase CGR2 probable pectin methylesterase CGR3 uncharacterized protein At3g49720 uncharacterized protein At3g49720-like uncharacterized protein At3g49720-like probable pectin methylesterase CGR2 probable pectin methylesterase CGR2 uncharacterized protein At3g49720 putative pectin methylesterase CGR3 putative pectin methylesterase CGR3
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01250 Biosynthesis of nucleotide sugars 3
sly04145 Phagosome 2
sly00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00270 Cysteine and methionine metabolism 3
sly01230 Biosynthesis of amino acids 3
sly00520 Amino sugar and nucleotide sugar metabolism 2
sly00670 One carbon pool by folate 2
sly00999 Biosynthesis of various plant secondary metabolites 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00190 Oxidative phosphorylation 2
ppo04142 Lysosome 2
ppo04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 3
ppo00520 Amino sugar and nucleotide sugar metabolism 3
ppo01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00520 Amino sugar and nucleotide sugar metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00520 Amino sugar and nucleotide sugar metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04144 Endocytosis 3
ghi04130 SNARE interactions in vesicular transport 2
ghi04517 IgSF CAM signaling 2
ghi05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00310 Lysine degradation 2
bna00541 Biosynthesis of various nucleotide sugars 2
bna01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00270 Cysteine and methionine metabolism 4
sot00670 One carbon pool by folate 3
sot01230 Biosynthesis of amino acids 3
sot00999 Biosynthesis of various plant secondary metabolites 2
sot01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 2
cit04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 824134 836710 100805476 100778341 101256717 101245514 4325464 100272653 100276063 103873032 103875453 100243785 100244559 7469664 7470771 25482029 123060057 123068534 123442638 107935263 107935264 106360577 106441240 8073315 102583825 102578463 102624811 102615263 100827884 107828760 107768381
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