ATTED-II : GeneCoexpression result

Species	Gene	Description
ppo-u.5	7470967	uncharacterized LOC7470967
ppo-r.4	7470967	uncharacterized LOC7470967
gma-u.5	100817519	uncharacterized LOC100817519
gma-u.5	100803849	uncharacterized LOC100803849
mtr-u.5	25487297	uncharacterized LOC25487297
ath-u.5	AT3G15120	P-loop containing nucleoside triphosphate hydrolases superfamily protein
vvi-u.5	100243511	uncharacterized LOC100243511
sly-u.5	101247940	uncharacterized LOC101247940
osa-u.5	4326327	uncharacterized LOC4326327
zma-u.5	103652548	uncharacterized LOC103652548

functional annotation

KEGG

GO BP

GO:0045944 [list] [network] positive regulation of transcription by RNA polymerase II

(159 genes)

IEA

GO CC

GO:0005634 [list] [network] nucleus

(3662 genes)

IEA

GO MF

GO:0042393 [list] [network] histone binding	(71 genes)	IEA
GO:0003682 [list] [network] chromatin binding	(170 genes)	IEA
GO:0016887 [list] [network] ATP hydrolysis activity	(550 genes)	IEA
GO:0005524 [list] [network] ATP binding	(2559 genes)	IEA

Protein

XP_024437445.2 [sequence] [blastp]

Subcellular
localization
wolf

nucl 6, chlo 2, cysk 1, chlo_mito 1

(predict for XP_024437445.2)

Subcellular
localization
TargetP

mito 3

(predict for XP_024437445.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ppo-u.5 for 7470967 .	ppo-r.4 for 7470967 .	gma-u.5 for 100817519 .	gma-u.5 for 100803849 .	mtr-u.5 for 25487297 .	ath-u.5 for AT3G15120 .	vvi-u.5 for 100243511 .	sly-u.5 for 101247940 .	osa-u.5 for 4326327 .	zma-u.5 for 103652548 .

Ortholog ID: 9478

Species

ath

gma

sly

osa

zma

bra

vvi

ppo

mtr

tae

hvu

ghi

bna

cre

sbi

sot

cit

bdi

nta

Symbol

Function^*

P-loop containing nucleoside triphosphate hydrolases superfamily protein

uncharacterized LOC100803849

uncharacterized LOC100817519

uncharacterized LOC101247940

uncharacterized LOC4326327

uncharacterized LOC103652548

uncharacterized LOC103859609

uncharacterized LOC100243511

uncharacterized LOC7470967

uncharacterized LOC25487297

uncharacterized LOC123070315

uncharacterized LOC123078771

uncharacterized LOC123441817

uncharacterized LOC107919975

uncharacterized LOC107939188

uncharacterized BNAC03G38920D

uncharacterized LOC106439398

uncharacterized protein

uncharacterized LOC8080826

uncharacterized LOC102599159

uncharacterized LOC102619535

uncharacterized LOC100828996

uncharacterized LOC107793191

uncharacterized LOC107769801

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03040	Spliceosome	4
ath03082	ATP-dependent chromatin remodeling	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03040	Spliceosome	6
gma03020	RNA polymerase	2
gma03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03082	ATP-dependent chromatin remodeling	2
sly03040	Spliceosome	2
sly04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03040	Spliceosome	3
osa03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00310	Lysine degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00310	Lysine degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04120	Ubiquitin mediated proteolysis	4
mtr00310	Lysine degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03082	ATP-dependent chromatin remodeling	2
tae03020	RNA polymerase	2
tae03420	Nucleotide excision repair	2
tae03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03040	Spliceosome	2
tae03020	RNA polymerase	2
tae03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03013	Nucleocytoplasmic transport	2
hvu03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00310	Lysine degradation	5
bna03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00310	Lysine degradation	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03040	Spliceosome	4
sbi04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04120	Ubiquitin mediated proteolysis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03040	Spliceosome	4
cit03015	mRNA surveillance pathway	2
cit03250	Viral life cycle - HIV-1	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00310	Lysine degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00310	Lysine degradation	2

Expression

Expression pattern

Entrez Gene ID^*

820743

100803849

100817519

101247940

4326327

103652548

103859609

100243511

7470967

25487297

123070315

123078771

123441817

107919975

107939188

106389189

106439398

5722086

8080826

102599159

102619535

100828996

107793191

107769801

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 7470967 (ppo-u.5 coexpression data)

Top 50 enrichment test to 7470967 (ppo-u.5 coexpression data)


Species	ppo	gma	mtr	ath	vvi	sly	osa	zma	sbi	nta	bra	cre	hvu	cit	bdi	sot	tae	bna	ghi
Paralog	2	2	1	1	1	1	1	1	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 7470967 (ppo-u.5 coexpression data)

Top 50 enrichment test to 7470967 (ppo-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**