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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7471114   calmodulin-binding transcription activator 5 
 ppo-r.4   7471114   calmodulin-binding transcription activator 5 
 ppo-u.5   7482265   calmodulin-binding transcription activator 5 
 gma-u.5   100793970   calmodulin-binding transcription activator 5 
 gma-u.5   100776839   calmodulin-binding transcription activator 5 
 gma-u.5   100819198   calmodulin-binding transcription activator 5 
 mtr-u.5   11427895   calmodulin-binding transcription activator 5 
 mtr-u.5   11413919   calmodulin-binding transcription activator 5 
 ath-u.5   AT3G16940   calmodulin-binding transcription activator 
 vvi-u.5   100243111   calmodulin-binding transcription activator 5 
 sly-u.5   101055610   calmodulin-binding transcription factor SR3 
 sly-u.5   SR3L   calmodulin-binding transcription factor SR3L 
 osa-u.5   4343265   calmodulin-binding transcription activator CBT-like 
 zma-u.5   100502366   Calmodulin-binding transcription activator 5 

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Top 50 coexpressed genes to 7471114 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7471114 (ppo-u.5 coexpression data)

CoexMap"7471114"


ppoLOC7471114 | Entrez gene ID : 7471114    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 3 3 2 1 1 2 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006357 [list] [network] regulation of transcription by RNA polymerase II  (481 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (3662 genes)  IEA  
GO MF
GO:0003712 [list] [network] transcription coregulator activity  (154 genes)  IEA  
GO:0003690 [list] [network] double-stranded DNA binding  (569 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4916 genes)  IEA  
Protein XP_024462496.1 [sequence] [blastp]
XP_024462497.1 [sequence] [blastp]
XP_024462498.1 [sequence] [blastp]
XP_024462499.1 [sequence] [blastp]
XP_024462500.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  cyto 2,  chlo 1  (predict for XP_024462496.1)
nucl 6,  cyto 2,  chlo 1  (predict for XP_024462497.1)
nucl 6,  cyto 2,  chlo 1  (predict for XP_024462498.1)
nucl 6,  cyto 2,  chlo 1  (predict for XP_024462499.1)
nucl 6,  cyto 2,  chlo 1  (predict for XP_024462500.1)
Subcellular
localization
TargetP
other 8  (predict for XP_024462496.1)
other 8  (predict for XP_024462497.1)
other 8  (predict for XP_024462498.1)
other 8  (predict for XP_024462499.1)
other 8  (predict for XP_024462500.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7471114

.
ppo-r.4
for
7471114

.
ppo-u.5
for
7482265

.
gma-u.5
for
100793970

.
gma-u.5
for
100776839

.
gma-u.5
for
100819198

.
mtr-u.5
for
11427895

.
mtr-u.5
for
11413919

.
ath-u.5
for
AT3G16940

.
vvi-u.5
for
100243111

.
sly-u.5
for
101055610

.
sly-u.5
for
SR3L

.
osa-u.5
for
4343265

.
zma-u.5
for
100502366

.


Ortholog ID: 5513
Species ath gma gma sly sly osa zma bra bra vvi ppo ppo mtr mtr tae tae hvu ghi ghi bna bna sbi sot sot cit bdi nta nta
Symbol AT3G16940 LOC100793970 LOC100776839 SR3L LOC101055610 LOC4343265 LOC100502366 LOC103869726 LOC103833552 LOC100243111 LOC7471114 LOC7482265 LOC11427895 LOC11413919 LOC123188505 LOC123052667 LOC123426043 LOC107896615 LOC107888949 LOC106415182 LOC106360667 LOC8077453 LOC102582198 LOC102603199 LOC102625774 LOC100841919 LOC107818802 LOC107811137
Function* calmodulin-binding transcription activator calmodulin-binding transcription activator 5 calmodulin-binding transcription activator 5 calmodulin-binding transcription factor SR3L calmodulin-binding transcription factor SR3 calmodulin-binding transcription activator CBT-like Calmodulin-binding transcription activator 5 calmodulin-binding transcription activator 6 calmodulin-binding transcription activator 5 calmodulin-binding transcription activator 5 calmodulin-binding transcription activator 5 calmodulin-binding transcription activator 5 calmodulin-binding transcription activator 5 calmodulin-binding transcription activator 5 calmodulin-binding transcription activator CBT calmodulin-binding transcription activator CBT calmodulin-binding transcription activator CBT calmodulin-binding transcription activator 5 calmodulin-binding transcription activator 5 calmodulin-binding transcription activator 5 calmodulin-binding transcription activator 5 calmodulin-binding transcription activator 6 calmodulin-binding transcription activator 6 calmodulin-binding transcription activator 5-like calmodulin-binding transcription activator 5 calmodulin-binding transcription activator CBT calmodulin-binding transcription activator 5 calmodulin-binding transcription activator 5
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00500 Starch and sucrose metabolism 2
sly00561 Glycerolipid metabolism 2
sly04016 MAPK signaling pathway - plant 2
sly04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04016 MAPK signaling pathway - plant 2
bra04075 Plant hormone signal transduction 2
bra04626 Plant-pathogen interaction 2
bra04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03015 mRNA surveillance pathway 2
ppo03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00630 Glyoxylate and dicarboxylate metabolism 4
ghi00220 Arginine biosynthesis 2
ghi00250 Alanine, aspartate and glutamate metabolism 2
ghi00260 Glycine, serine and threonine metabolism 2
ghi00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 2
ghi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 4
bna03015 mRNA surveillance pathway 4
bna03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 4
bna03015 mRNA surveillance pathway 4
bna03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00010 Glycolysis / Gluconeogenesis 2
sot00030 Pentose phosphate pathway 2
sot00051 Fructose and mannose metabolism 2
sot00052 Galactose metabolism 2
sot01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04120 Ubiquitin mediated proteolysis 2
sot04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03420 Nucleotide excision repair 2
cit04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03082 ATP-dependent chromatin remodeling 2
bdi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00562 Inositol phosphate metabolism 3
nta04070 Phosphatidylinositol signaling system 3
nta04145 Phagosome 3
nta03013 Nucleocytoplasmic transport 2
nta03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00562 Inositol phosphate metabolism 3
nta04070 Phosphatidylinositol signaling system 3
nta04145 Phagosome 3
nta03013 Nucleocytoplasmic transport 2
nta03015 mRNA surveillance pathway 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 820950 100793970 100776839 101055570 101055610 4343265 100502366 103869726 103833552 100243111 7471114 7482265 11427895 11413919 123188505 123052667 123426043 107896615 107888949 106415182 106360667 8077453 102582198 102603199 102625774 100841919 107818802 107811137
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