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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7471119   putative beta-D-xylosidase 
 ppo-r.4   7471119   putative beta-D-xylosidase 
 ppo-u.5   7460449   probable beta-D-xylosidase 2 
 ppo-u.5   7482262   putative beta-D-xylosidase 
 ppo-u.5   7491265   probable beta-D-xylosidase 2 
 gma-u.5   100789316   probable beta-D-xylosidase 2 
 gma-u.5   100778624   probable beta-D-xylosidase 2 
 gma-u.5   100805839   beta-D-xylosidase 1 
 mtr-u.5   11412498   beta-D-xylosidase 1 
 mtr-u.5   11430018   probable beta-D-xylosidase 2 
 mtr-u.5   11407644   probable beta-D-xylosidase 2 
 ath-u.5   BXL1   beta-xylosidase 1 
 ath-u.5   BXL2   beta-xylosidase 2 
 vvi-u.5   100252178   probable beta-D-xylosidase 2 
 vvi-u.5   100249978   putative beta-D-xylosidase 
 sly-u.5   Arf/Xyl1   alpha-L-arabinofuranosidase/beta-xylosidase 
 sly-u.5   Arf/Xyl2   alpha-L-arabinofuranosidase/beta-xylosidase 
 osa-u.5   4351103   probable beta-D-xylosidase 2 
 zma-u.5   100279508   uncharacterized LOC100279508 

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Top 50 coexpressed genes to 7471119 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7471119 (ppo-u.5 coexpression data)

CoexMap"7471119"


ppoLOC7471119 | Entrez gene ID : 7471119    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 5 3 3 2 2 2 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0031222 [list] [network] arabinan catabolic process  (16 genes)  IEA  
GO:0045493 [list] [network] xylan catabolic process  (16 genes)  IEA  
GO CC
GO:0009505 [list] [network] plant-type cell wall  (68 genes)  IEA  
GO MF
GO:0009044 [list] [network] xylan 1,4-beta-xylosidase activity  (16 genes)  IEA  
GO:0046556 [list] [network] alpha-L-arabinofuranosidase activity  (20 genes)  IEA  
Protein XP_002311398.3 [sequence] [blastp]
Subcellular
localization
wolf
extr 5,  E.R. 1,  golg 1,  chlo 1,  plas 1,  vacu 1,  cyto_E.R. 1  (predict for XP_002311398.3)
Subcellular
localization
TargetP
scret 9  (predict for XP_002311398.3)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7471119

.
ppo-r.4
for
7471119

.
ppo-u.5
for
7460449

.
ppo-u.5
for
7482262

.
ppo-u.5
for
7491265

.
gma-u.5
for
100789316

.
gma-u.5
for
100778624

.
gma-u.5
for
100805839

.
mtr-u.5
for
11412498

.
mtr-u.5
for
11430018

.
mtr-u.5
for
11407644

.
ath-u.5
for
BXL1

.
ath-u.5
for
BXL2

.
vvi-u.5
for
100252178

.
vvi-u.5
for
100249978

.
sly-u.5
for
Arf/Xyl1

.
sly-u.5
for
Arf/Xyl2

.
osa-u.5
for
4351103

.
zma-u.5
for
100279508

.


Ortholog ID: 3153
Species ath ath gma gma sly sly osa zma bra bra vvi vvi ppo ppo mtr mtr tae tae ghi ghi bna bna sbi sot sot cit cit bdi nta nta
Symbol BXL2 BXL1 LOC100812823 LOC100809501 Arf/Xyl1 Arf/Xyl2 LOC4351103 LOC100279508 LOC103854592 LOC103874626 LOC100252178 LOC100249978 LOC7471119 LOC7460449 LOC11412498 LOC11407644 LOC123096840 LOC123086223 LOC107896612 LOC107946033 LOC106348810 LOC106401837 LOC8070217 LOC102606442 LOC102603514 LOC102627794 LOC102625511 LOC100829091 LOC107818832 LOC107781973
Function* beta-xylosidase 2 beta-xylosidase 1 beta-D-xylosidase 1 probable beta-D-xylosidase 2 alpha-L-arabinofuranosidase/beta-xylosidase alpha-L-arabinofuranosidase/beta-xylosidase probable beta-D-xylosidase 2 uncharacterized LOC100279508 beta-D-xylosidase 1 beta-D-xylosidase 1 probable beta-D-xylosidase 2 putative beta-D-xylosidase putative beta-D-xylosidase probable beta-D-xylosidase 2 beta-D-xylosidase 1 probable beta-D-xylosidase 2 probable beta-D-xylosidase 2 probable beta-D-xylosidase 2 beta-D-xylosidase 1 probable beta-D-xylosidase 2 beta-D-xylosidase 1 probable beta-D-xylosidase 2 beta-D-xylosidase 1 beta-D-xylosidase 1 probable beta-D-xylosidase 2 beta-D-xylosidase 1 probable beta-D-xylosidase 2 probable beta-D-xylosidase 2 beta-D-xylosidase 1 putative beta-D-xylosidase 2
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00591 Linoleic acid metabolism 2
gma00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00908 Zeatin biosynthesis 3
bra01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00908 Zeatin biosynthesis 2
bra00910 Nitrogen metabolism 2
bra01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00999 Biosynthesis of various plant secondary metabolites 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00280 Valine, leucine and isoleucine degradation 4
mtr00561 Glycerolipid metabolism 3
mtr00520 Amino sugar and nucleotide sugar metabolism 2
mtr01250 Biosynthesis of nucleotide sugars 2
mtr00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00940 Phenylpropanoid biosynthesis 4
tae00260 Glycine, serine and threonine metabolism 3
tae00310 Lysine degradation 3
tae04146 Peroxisome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00940 Phenylpropanoid biosynthesis 6
tae00941 Flavonoid biosynthesis 3
tae00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 3
tae00260 Glycine, serine and threonine metabolism 3
tae00310 Lysine degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00230 Purine metabolism 2
ghi00760 Nicotinate and nicotinamide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04016 MAPK signaling pathway - plant 2
ghi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00020 Citrate cycle (TCA cycle) 2
bna00630 Glyoxylate and dicarboxylate metabolism 2
bna01200 Carbon metabolism 2
bna01210 2-Oxocarboxylic acid metabolism 2
bna01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00280 Valine, leucine and isoleucine degradation 5
nta00250 Alanine, aspartate and glutamate metabolism 3
nta00270 Cysteine and methionine metabolism 3
nta01200 Carbon metabolism 3
nta01210 2-Oxocarboxylic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00460 Cyanoamino acid metabolism 2
nta00500 Starch and sucrose metabolism 2
nta00999 Biosynthesis of various plant secondary metabolites 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 837940 834996 100812823 100809501 101055558 101055559 4351103 100279508 103854592 103874626 100252178 100249978 7471119 7460449 11412498 11407644 123096840 123086223 107896612 107946033 106348810 106401837 8070217 102606442 102603514 102627794 102625511 100829091 107818832 107781973
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