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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7472513   root phototropism protein 3 
 ppo-r.4   7472513   root phototropism protein 3 
 ppo-u.5   7485049   root phototropism protein 3 
 gma-u.5   100790848   root phototropism protein 3 
 gma-u.5   100810791   root phototropism protein 3 
 gma-u.5   100815459   root phototropism protein 3 
 mtr-u.5   11413369   root phototropism protein 3 
 mtr-u.5   11428537   root phototropism protein 3 
 ath-u.5   NPH3   Phototropic-responsive NPH3 family protein 
 sly-u.5   101246384   root phototropism protein 3-like 
 sly-u.5   101267854   root phototropism protein 3 
 osa-u.5   4329720   coleoptile phototropism protein 1-like 
 zma-u.5   103646846   coleoptile phototropism protein 1 
 zma-u.5   100281161   uncharacterized LOC100281161 

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Top 50 coexpressed genes to 7472513 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7472513 (ppo-u.5 coexpression data)

CoexMap"7472513"


ppoLOC7472513 | Entrez gene ID : 7472513    
Species ppo gma mtr ath sly osa zma tae hvu ghi bdi cit vvi bra cre sbi bna nta sot
Paralog 3 3 2 1 2 1 2 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (4916 genes)  IEA  
Protein XP_002323955.4 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  nucl 4,  chlo 1,  vacu 1  (predict for XP_002323955.4)
Subcellular
localization
TargetP
other 9  (predict for XP_002323955.4)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7472513

.
ppo-r.4
for
7472513

.
ppo-u.5
for
7485049

.
gma-u.5
for
100790848

.
gma-u.5
for
100810791

.
gma-u.5
for
100815459

.
mtr-u.5
for
11413369

.
mtr-u.5
for
11428537

.
ath-u.5
for
NPH3

.
sly-u.5
for
101246384

.
sly-u.5
for
101267854

.
osa-u.5
for
4329720

.
zma-u.5
for
103646846

.
zma-u.5
for
100281161

.


Ortholog ID: 5003
Species ath gma gma sly sly osa zma zma bra bra ppo ppo mtr mtr tae tae hvu ghi ghi bna bna sbi sbi sot sot cit bdi nta nta
Symbol NPH3 LOC100810791 LOC100820028 LOC101267854 LOC101246384 LOC4329720 LOC100281161 LOC103646846 LOC103873855 LOC103837524 LOC7485049 LOC7472513 LOC11413369 LOC11428537 LOC123136056 LOC123131985 LOC123404759 LOC107908937 LOC107918420 LOC106348061 LOC106426665 LOC8068928 LOC8080295 LOC102603903 LOC102595778 LOC102621179 LOC100831661 LOC107812219 LOC107794853
Function* Phototropic-responsive NPH3 family protein root phototropism protein 3 root phototropism protein 3 root phototropism protein 3 root phototropism protein 3-like coleoptile phototropism protein 1-like uncharacterized LOC100281161 coleoptile phototropism protein 1 root phototropism protein 3 root phototropism protein 3 root phototropism protein 3 root phototropism protein 3 root phototropism protein 3 root phototropism protein 3 coleoptile phototropism protein 1 coleoptile phototropism protein 1 coleoptile phototropism protein 1 root phototropism protein 3 root phototropism protein 3 root phototropism protein 3 root phototropism protein 3 coleoptile phototropism protein 1 coleoptile phototropism protein 1 root phototropism protein 3 root phototropism protein 3-like root phototropism protein 3 coleoptile phototropism protein 1 root phototropism protein 3 root phototropism protein 3
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04145 Phagosome 2
ath04517 IgSF CAM signaling 2
ath04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma02010 ABC transporters 3
gma04981 Folate transport and metabolism 3
gma00062 Fatty acid elongation 3
gma04626 Plant-pathogen interaction 3
gma00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04016 MAPK signaling pathway - plant 2
sly04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04016 MAPK signaling pathway - plant 2
osa04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00062 Fatty acid elongation 2
zma04626 Plant-pathogen interaction 2
zma02010 ABC transporters 2
zma04981 Folate transport and metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00195 Photosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00500 Starch and sucrose metabolism 3
ppo00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae02010 ABC transporters 2
tae04981 Folate transport and metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00904 Diterpenoid biosynthesis 2
sbi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00100 Steroid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03018 RNA degradation 3
sot03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04626 Plant-pathogen interaction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 836554 100810791 100820028 101267854 101246384 4329720 100281161 103646846 103873855 103837524 7485049 7472513 11413369 11428537 123136056 123131985 123404759 107908937 107918420 106348061 106426665 8068928 8080295 102603903 102595778 102621179 100831661 107812219 107794853
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