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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-m.4   7473279   putative cullin-like protein 2 
 ghi-r.1   107894506   cullin-1 
 ghi-r.1   107920498   cullin-1 
 sly-u.5   101246183   cullin-1 
 sot-r.1   102594086   cullin-1-like 
 nta-r.1   107784182   cullin-1 
 nta-r.1   107799963   cullin-1-like 

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Top 50 coexpressed genes to 7473279 (ppo-m.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7473279 (ppo-m.4 coexpression data)

CoexMap"7473279"


ppoLOC7473279 | Entrez gene ID : 7473279    
Species ppo ghi sly sot nta hvu tae sbi vvi zma bdi cre ath osa mtr cit bna bra gma
Paralog 1 2 1 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006511 [list] [network] ubiquitin-dependent protein catabolic process  (340 genes)  IEA  
GO:0016567 [list] [network] protein ubiquitination  (417 genes)  IEA  
GO CC
GO:0031461 [list] [network] cullin-RING ubiquitin ligase complex  (129 genes)  IEA  
GO MF
GO:0031625 [list] [network] ubiquitin protein ligase binding  (47 genes)  IEA  
Protein XP_024439292.1 [sequence] [blastp]
XP_024439293.1 [sequence] [blastp]
XP_024439294.1 [sequence] [blastp]
XP_024439295.1 [sequence] [blastp]
XP_024439296.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  nucl 3,  chlo 1,  cysk_nucl 1,  nucl_plas 1  (predict for XP_024439292.1)
cyto 5,  nucl 3,  chlo 1,  cysk_nucl 1,  nucl_plas 1  (predict for XP_024439293.1)
cyto 5,  nucl 3,  chlo 1,  cysk_nucl 1,  nucl_plas 1  (predict for XP_024439294.1)
cyto 5,  nucl 4,  chlo 1,  pero 1  (predict for XP_024439295.1)
cyto 5,  nucl 4,  chlo 1,  pero 1  (predict for XP_024439296.1)
Subcellular
localization
TargetP
other 9  (predict for XP_024439292.1)
other 9  (predict for XP_024439293.1)
other 9  (predict for XP_024439294.1)
other 7  (predict for XP_024439295.1)
other 7  (predict for XP_024439296.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-m.4
for
7473279
ghi-r.1
for
107894506
ghi-r.1
for
107920498
sly-u.5
for
101246183
sot-r.1
for
102594086
nta-r.1
for
107784182
nta-r.1
for
107799963


Ortholog ID: 18805
Species ghi ghi sly sot nta nta
Symbol LOC107894506 LOC107920498 LOC101246183 LOC102594086 LOC107784182 LOC107799963
Function* cullin-1 cullin-1 cullin-1 cullin-1-like cullin-1 cullin-1-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04712 Circadian rhythm - plant 2
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00562 Inositol phosphate metabolism 2
nta00564 Glycerophospholipid metabolism 2
nta04070 Phosphatidylinositol signaling system 2
nta03083 Polycomb repressive complex 2
nta04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00562 Inositol phosphate metabolism 2
nta00564 Glycerophospholipid metabolism 2
nta04070 Phosphatidylinositol signaling system 2
nta03083 Polycomb repressive complex 2
nta04120 Ubiquitin mediated proteolysis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107894506 107920498 101246183 102594086 107784182 107799963
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