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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7473560   uncharacterized LOC7473560 
 ppo-r.4   7473560   uncharacterized LOC7473560 
 ppo-m.4   7473560   uncharacterized LOC7473560 
 ppo-u.5   7458920   uncharacterized LOC7458920 
 ppo-u.5   7470210   probable inactive dual specificity protein phosphatase-like At4g18593 
 gma-u.5   100776877   dual specificity protein phosphatase 12 
 gma-u.5   100788597   dual specificity protein phosphatase 12-like 
 gma-u.5   100804683   dual specificity protein phosphatase 12 
 mtr-u.5   25498227   probable inactive dual specificity protein phosphatase-like At4g18593 
 mtr-u.5   11414799   dual specificity protein phosphatase 12 
 ath-u.5   AT4G18593   dual specificity protein phosphatase-like protein 
 vvi-u.5   100253344   probable inactive dual specificity protein phosphatase-like At4g18593 
 vvi-u.5   100256857   uncharacterized LOC100256857 
 sly-u.5   101256446   probable inactive dual specificity protein phosphatase-like At4g18593 
 sly-u.5   101250280   uncharacterized LOC101250280 
 osa-u.5   4328898   probable inactive dual specificity protein phosphatase-like At4g18593 
 osa-u.5   4349715   dual specificity protein phosphatase 12 
 osa-u.5   4351431   uncharacterized LOC4351431 
 zma-u.5   100191164   putative inactive dual specificity protein phosphatase-like 
 zma-u.5   100275792   putative inactive dual specificity protein phosphatase-like 

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Top 50 coexpressed genes to 7473560 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7473560 (ppo-u.5 coexpression data)

CoexMap"7473560"


ppoLOC7473560 | Entrez gene ID : 7473560    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 5 3 2 1 2 2 3 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006470 [list] [network] protein dephosphorylation  (162 genes)  IEA  
GO CC
GO MF
GO:0008138 [list] [network] protein tyrosine/serine/threonine phosphatase activity  (21 genes)  IEA  
Protein XP_002308890.1 [sequence] [blastp]
XP_024459670.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 3,  cyto 2,  cysk 2,  chlo 1,  plas 1,  extr 1,  golg 1,  golg_plas 1  (predict for XP_002308890.1)
nucl 3,  cyto 2,  cysk 2,  chlo 1,  plas 1,  extr 1,  golg 1,  golg_plas 1  (predict for XP_024459670.1)
Subcellular
localization
TargetP
other 5,  scret 3  (predict for XP_002308890.1)
other 5,  scret 3  (predict for XP_024459670.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7473560

.
ppo-r.4
for
7473560

.
ppo-m.4
for
7473560

.
ppo-u.5
for
7458920

.
ppo-u.5
for
7470210

.
gma-u.5
for
100776877

.
gma-u.5
for
100788597

.
gma-u.5
for
100804683

.
mtr-u.5
for
25498227

.
mtr-u.5
for
11414799

.
ath-u.5
for
AT4G18593

.
vvi-u.5
for
100253344

.
vvi-u.5
for
100256857

.
sly-u.5
for
101256446

.
sly-u.5
for
101250280

.
osa-u.5
for
4328898

.
osa-u.5
for
4349715

.
osa-u.5
for
4351431

.
zma-u.5
for
100191164

.
zma-u.5
for
100275792

.


Ortholog ID: 3478
Species ath gma gma sly sly osa osa zma bra vvi vvi ppo ppo mtr mtr tae tae hvu hvu ghi bna cre sbi sbi sot cit bdi bdi nta nta
Symbol AT4G18593 LOC100804683 LOC100788597 LOC101250280 LOC101256446 LOC4349715 LOC4328898 LOC100275792 LOC103856634 LOC100256857 LOC100253344 LOC7458920 LOC7470210 LOC11414799 LOC25498227 LOC123120458 LOC123111275 LOC123395608 LOC123430506 LOC121223516 LOC106373237 CHLRE_07g314351v5 LOC8083777 LOC8059041 LOC102597117 LOC102612683 LOC100837738 LOC100820947 LOC107812955 LOC107797943
Function* dual specificity protein phosphatase-like protein dual specificity protein phosphatase 12 dual specificity protein phosphatase 12-like uncharacterized LOC101250280 probable inactive dual specificity protein phosphatase-like At4g18593 dual specificity protein phosphatase 12 probable inactive dual specificity protein phosphatase-like At4g18593 putative inactive dual specificity protein phosphatase-like probable inactive dual specificity protein phosphatase-like At4g18593 uncharacterized LOC100256857 probable inactive dual specificity protein phosphatase-like At4g18593 uncharacterized LOC7458920 probable inactive dual specificity protein phosphatase-like At4g18593 dual specificity protein phosphatase 12 probable inactive dual specificity protein phosphatase-like At4g18593 dual specificity protein phosphatase 12 dual specificity protein phosphatase 12 dual specificity protein phosphatase 12-like probable dual specificity protein phosphatase DDB_G0281963 dual specificity protein phosphatase 12 probable inactive dual specificity protein phosphatase-like At4g18593 uncharacterized protein dual specificity protein phosphatase 12 probable inactive dual specificity protein phosphatase-like At4g18593 dual specificity protein phosphatase 12-like uncharacterized LOC102612683 dual specificity protein phosphatase 12 dual specificity protein phosphatase 12 uncharacterized LOC107812955 uncharacterized LOC107797943
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 3
gma04016 MAPK signaling pathway - plant 2
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03020 RNA polymerase 2
gma03018 RNA degradation 2
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01240 Biosynthesis of cofactors 2
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 4
sly03420 Nucleotide excision repair 2
sly03060 Protein export 2
sly03018 RNA degradation 2
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 2
osa03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03050 Proteasome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 3
zma04130 SNARE interactions in vesicular transport 2
zma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 5
bra00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 2
ppo01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03020 RNA polymerase 6
mtr03420 Nucleotide excision repair 6
mtr03010 Ribosome 6
mtr03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03082 ATP-dependent chromatin remodeling 5
tae03010 Ribosome 2
tae03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 3
tae03020 RNA polymerase 2
tae03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03015 mRNA surveillance pathway 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 827592 100804683 100788597 101250280 101256446 4349715 4328898 100275792 103856634 100256857 100253344 7458920 7470210 11414799 25498227 123120458 123111275 123395608 123430506 121223516 106373237 66053950 8083777 8059041 102597117 102612683 100837738 100820947 107812955 107797943
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