Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7473604   DNA repair protein recA homolog 2, mitochondrial 
 ppo-r.4   7473604   DNA repair protein recA homolog 2, mitochondrial 
 ppo-u.5   7484023   DNA repair protein recA homolog 2, mitochondrial 
 gma-u.5   100777423   DNA repair protein recA homolog 2, mitochondrial 
 mtr-u.5   11415363   DNA repair protein recA homolog 2, mitochondrial 
 ath-u.5   RECA3   RECA homolog 3 
 vvi-u.5   100248558   DNA repair protein recA homolog 2, mitochondrial 
 sly-u.5   101263651   DNA repair protein recA homolog 2, mitochondrial 
 osa-u.5   9270244   DNA repair protein recA homolog 2, mitochondrial 
 zma-u.5   100276540   uncharacterized LOC100276540 

close


Top 50 coexpressed genes to 7473604 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 7473604 (ppo-u.5 coexpression data)

CoexMap"7473604"


ppoLOC7473604 | Entrez gene ID : 7473604    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 3 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006281 [list] [network] DNA repair  (290 genes)  IEA  
GO CC
GO MF
GO:0140664 [list] [network] ATP-dependent DNA damage sensor activity  (25 genes)  IEA  
GO:0003697 [list] [network] single-stranded DNA binding  (62 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (2559 genes)  IEA  
Protein XP_002308017.3 [sequence] [blastp]
XP_024458615.1 [sequence] [blastp]
XP_024458616.1 [sequence] [blastp]
XP_024458617.1 [sequence] [blastp]
XP_024458618.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  mito 1,  cyto_mito 1  (predict for XP_002308017.3)
chlo 9,  mito 1,  cyto_mito 1  (predict for XP_024458615.1)
chlo 9,  mito 1,  cyto_mito 1  (predict for XP_024458616.1)
chlo 9,  mito 1,  cyto_mito 1  (predict for XP_024458617.1)
chlo_mito 5,  chlo 4,  mito 4  (predict for XP_024458618.1)
Subcellular
localization
TargetP
mito 9  (predict for XP_002308017.3)
mito 8  (predict for XP_024458615.1)
mito 9  (predict for XP_024458616.1)
mito 9  (predict for XP_024458617.1)
mito 8  (predict for XP_024458618.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7473604

.
ppo-r.4
for
7473604

.
ppo-u.5
for
7484023

.
gma-u.5
for
100777423

.
mtr-u.5
for
11415363

.
ath-u.5
for
RECA3

.
vvi-u.5
for
100248558

.
sly-u.5
for
101263651

.
osa-u.5
for
9270244

.
zma-u.5
for
100276540

.


Ortholog ID: 9467
Species ath gma sly osa zma bra vvi ppo ppo mtr hvu ghi ghi bna bna sbi sot cit bdi bdi nta nta
Symbol RECA3 LOC100777423 LOC101263651 LOC9270244 LOC100276540 LOC103859268 LOC100248558 LOC7484023 LOC7473604 LOC11415363 LOC123445468 LOC107935233 LOC107925706 LOC106439172 LOC106388978 LOC8062304 LOC102590004 LOC102612122 LOC100830620 LOC100840914 LOC107798485 LOC107784664
Function* RECA homolog 3 DNA repair protein recA homolog 2, mitochondrial DNA repair protein recA homolog 2, mitochondrial DNA repair protein recA homolog 2, mitochondrial uncharacterized LOC100276540 DNA repair protein recA homolog 2, mitochondrial DNA repair protein recA homolog 2, mitochondrial DNA repair protein recA homolog 2, mitochondrial DNA repair protein recA homolog 2, mitochondrial DNA repair protein recA homolog 2, mitochondrial DNA repair protein recA homolog 2, mitochondrial DNA repair protein recA homolog 2, mitochondrial DNA repair protein recA homolog 2, mitochondrial DNA repair protein recA homolog 2, mitochondrial-like DNA repair protein recA homolog 2, mitochondrial DNA repair protein recA homolog 2, mitochondrial DNA repair protein recA homolog 2, mitochondrial DNA repair protein recA homolog 2, mitochondrial DNA repair protein recA homolog 2, mitochondrial DNA repair protein recA homolog 2, mitochondrial DNA repair protein recA homolog 2, mitochondrial DNA repair protein recA homolog 2, mitochondrial-like
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 4
osa03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 3
bra03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01240 Biosynthesis of cofactors 2
vvi04144 Endocytosis 2
vvi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00510 N-Glycan biosynthesis 2
cit00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 4
nta00260 Glycine, serine and threonine metabolism 2
nta00460 Cyanoamino acid metabolism 2
nta00630 Glyoxylate and dicarboxylate metabolism 2
nta00670 One carbon pool by folate 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00260 Glycine, serine and threonine metabolism 2
nta00460 Cyanoamino acid metabolism 2
nta00630 Glyoxylate and dicarboxylate metabolism 2
nta00670 One carbon pool by folate 2
nta01200 Carbon metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 820177 100777423 101263651 9270244 100276540 103859268 100248558 7484023 7473604 11415363 123445468 107935233 107925706 106439172 106388978 8062304 102590004 102612122 100830620 100840914 107798485 107784664
The preparation time of this page was 0.1 [sec].