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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7474888   uncharacterized LOC7474888 
 ppo-r.4   7474888   uncharacterized LOC7474888 
 ppo-m.4   7474888   uncharacterized LOC7474888 
 gma-u.5   100781401   alanyl-tRNA editing protein AlaX-L-like 
 mtr-u.5   11413170   alanine--tRNA ligase 
 ath-u.5   AT3G16565   threonyl and alanyl tRNA synthetase second additional domain-containing protein 
 osa-u.5   4326034   uncharacterized LOC4326034 
 zma-u.5   100216661   uncharacterized LOC100216661 

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Top 50 coexpressed genes to 7474888 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7474888 (ppo-u.5 coexpression data)

CoexMap"7474888"


ppoLOC7474888 | Entrez gene ID : 7474888    
Species ppo gma mtr ath osa zma hvu sot vvi tae nta bra cit ghi bna bdi sly sbi cre
Paralog 3 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006419 [list] [network] alanyl-tRNA aminoacylation  (3 genes)  IEA  
GO:0006450 [list] [network] regulation of translational fidelity  (14 genes)  IEA  
GO CC
GO MF
GO:0002196 [list] [network] Ser-tRNA(Ala) deacylase activity  (1 genes)  IEA  
GO:0004813 [list] [network] alanine-tRNA ligase activity  (3 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (2559 genes)  IEA  
GO:0003676 [list] [network] nucleic acid binding  (4002 genes)  IEA  
Protein XP_002314450.3 [sequence] [blastp]
XP_024465141.2 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  nucl 1,  chlo 1,  plas 1,  cysk 1,  cysk_plas 1  (predict for XP_002314450.3)
cyto 6,  mito 1,  nucl 1,  extr 1,  pero 1,  chlo_mito 1,  cyto_mito 1,  mito_plas 1  (predict for XP_024465141.2)
Subcellular
localization
TargetP
other 8  (predict for XP_002314450.3)
other 8  (predict for XP_024465141.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7474888

.
ppo-r.4
for
7474888

.
ppo-m.4
for
7474888

.
gma-u.5
for
100781401

.
mtr-u.5
for
11413170

.
ath-u.5
for
AT3G16565

.
osa-u.5
for
4326034

.
zma-u.5
for
100216661

.


Ortholog ID: 12429
Species ath gma osa zma bra ppo mtr tae tae hvu ghi ghi bna bna sbi cit bdi
Symbol AT3G16565 LOC100781401 LOC4326034 LOC100216661 LOC103869749 LOC7474888 LOC11413170 LOC123064341 LOC123059848 LOC123442527 LOC107931493 LOC107935157 LOC125604406 LOC106452115 LOC110433420 LOC102620033 LOC100840915
Function* threonyl and alanyl tRNA synthetase second additional domain-containing protein alanyl-tRNA editing protein AlaX-L-like uncharacterized LOC4326034 uncharacterized LOC100216661 alanine--tRNA ligase uncharacterized LOC7474888 alanine--tRNA ligase alanine--tRNA ligase alanine--tRNA ligase alanine--tRNA ligase alanine--tRNA ligase alanine--tRNA ligase alanine--tRNA ligase-like alanine--tRNA ligase alanine--tRNA ligase uncharacterized LOC102620033 alanine--tRNA ligase
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00511 Other glycan degradation 3
gma00230 Purine metabolism 2
gma04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00520 Amino sugar and nucleotide sugar metabolism 3
osa01250 Biosynthesis of nucleotide sugars 3
osa00052 Galactose metabolism 2
osa00250 Alanine, aspartate and glutamate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00941 Flavonoid biosynthesis 4
ppo04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00860 Porphyrin metabolism 2
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
tae00270 Cysteine and methionine metabolism 2
tae00350 Tyrosine metabolism 2
tae00360 Phenylalanine metabolism 2
tae00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04144 Endocytosis 3
hvu04142 Lysosome 2
hvu04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04146 Peroxisome 6
bna00220 Arginine biosynthesis 2
bna00330 Arginine and proline metabolism 2
bna01230 Biosynthesis of amino acids 2
bna04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04146 Peroxisome 7
bna00220 Arginine biosynthesis 2
bna00330 Arginine and proline metabolism 2
bna01230 Biosynthesis of amino acids 2
bna04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04075 Plant hormone signal transduction 2
sbi04626 Plant-pathogen interaction 2
sbi02010 ABC transporters 2
sbi00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04130 SNARE interactions in vesicular transport 2
cit04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01240 Biosynthesis of cofactors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 820906 100781401 4326034 100216661 103869749 7474888 11413170 123064341 123059848 123442527 107931493 107935157 125604406 106452115 110433420 102620033 100840915
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