Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7475675   protein PHYTOCHROME-DEPENDENT LATE-FLOWERING 
 ppo-r.4   7475675   protein PHYTOCHROME-DEPENDENT LATE-FLOWERING 
 ppo-m.4   7475675   protein PHYTOCHROME-DEPENDENT LATE-FLOWERING 
 ppo-u.5   18094701   protein PHYTOCHROME-DEPENDENT LATE-FLOWERING 
 gma-u.5   100814582   protein PHYTOCHROME-DEPENDENT LATE-FLOWERING 
 gma-u.5   100810803   protein PHYTOCHROME-DEPENDENT LATE-FLOWERING 
 mtr-u.5   25502289   protein PHYTOCHROME-DEPENDENT LATE-FLOWERING 
 mtr-u.5   11434056   protein PHYTOCHROME-DEPENDENT LATE-FLOWERING 
 mtr-u.5   11427487   protein PHYTOCHROME-DEPENDENT LATE-FLOWERING 
 ath-u.5   AT1G72390   nuclear receptor coactivator 
 vvi-u.5   100265246   protein PHYTOCHROME-DEPENDENT LATE-FLOWERING 
 sly-u.5   101257868   protein PHYTOCHROME-DEPENDENT LATE-FLOWERING 
 osa-u.5   4348528   protein PHYTOCHROME-DEPENDENT LATE-FLOWERING 
 zma-u.5   103654689   protein PHYTOCHROME-DEPENDENT LATE-FLOWERING 

close


Top 50 coexpressed genes to 7475675 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 7475675 (ppo-u.5 coexpression data)

CoexMap"7475675"


ppoLOC7475675 | Entrez gene ID : 7475675    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 4 2 3 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006357 [list] [network] regulation of transcription by RNA polymerase II  (481 genes)  IEA  
GO CC
GO:0000124 [list] [network] SAGA complex  (24 genes)  IEA  
GO MF
GO:0003712 [list] [network] transcription coregulator activity  (154 genes)  IEA  
Protein XP_024454156.2 [sequence] [blastp]
XP_024454157.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 8,  chlo 1,  plas 1,  cysk 1,  cysk_plas 1  (predict for XP_024454156.2)
nucl 4,  chlo 2,  mito 1,  cyto_mito 1,  cyto 1,  plas 1,  cysk 1,  cysk_plas 1,  cyto_plas 1  (predict for XP_024454157.2)
Subcellular
localization
TargetP
other 4,  mito 3  (predict for XP_024454156.2)
mito 4  (predict for XP_024454157.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7475675

.
ppo-r.4
for
7475675

.
ppo-m.4
for
7475675

.
ppo-u.5
for
18094701

.
gma-u.5
for
100814582

.
gma-u.5
for
100810803

.
mtr-u.5
for
25502289

.
mtr-u.5
for
11434056

.
mtr-u.5
for
11427487

.
ath-u.5
for
AT1G72390

.
vvi-u.5
for
100265246

.
sly-u.5
for
101257868

.
osa-u.5
for
4348528

.
zma-u.5
for
103654689

.


Ortholog ID: 7093
Species ath gma gma sly osa zma bra bra vvi ppo ppo mtr mtr tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol AT1G72390 LOC100810803 LOC100814582 LOC101257868 LOC4348528 LOC103654689 LOC103831748 LOC103852779 LOC100265246 LOC18094701 LOC7475675 LOC11434056 LOC25502289 LOC123180830 LOC123042372 LOC123428286 LOC107906063 LOC107958373 LOC106433048 LOC106354212 LOC8067871 LOC102598206 LOC102613498 LOC100825324 LOC107806008 LOC107828181
Function* nuclear receptor coactivator protein PHYTOCHROME-DEPENDENT LATE-FLOWERING protein PHYTOCHROME-DEPENDENT LATE-FLOWERING protein PHYTOCHROME-DEPENDENT LATE-FLOWERING protein PHYTOCHROME-DEPENDENT LATE-FLOWERING protein PHYTOCHROME-DEPENDENT LATE-FLOWERING protein PHYTOCHROME-DEPENDENT LATE-FLOWERING protein PHYTOCHROME-DEPENDENT LATE-FLOWERING protein PHYTOCHROME-DEPENDENT LATE-FLOWERING protein PHYTOCHROME-DEPENDENT LATE-FLOWERING protein PHYTOCHROME-DEPENDENT LATE-FLOWERING protein PHYTOCHROME-DEPENDENT LATE-FLOWERING protein PHYTOCHROME-DEPENDENT LATE-FLOWERING protein PHYTOCHROME-DEPENDENT LATE-FLOWERING protein PHYTOCHROME-DEPENDENT LATE-FLOWERING protein PHYTOCHROME-DEPENDENT LATE-FLOWERING protein PHYTOCHROME-DEPENDENT LATE-FLOWERING protein PHYTOCHROME-DEPENDENT LATE-FLOWERING protein PHYTOCHROME-DEPENDENT LATE-FLOWERING-like protein PHYTOCHROME-DEPENDENT LATE-FLOWERING uncharacterized LOC8067871 mediator of RNA polymerase II transcription subunit 15a protein PHYTOCHROME-DEPENDENT LATE-FLOWERING mediator of RNA polymerase II transcription subunit 15a protein PHYTOCHROME-DEPENDENT LATE-FLOWERING-like protein PHYTOCHROME-DEPENDENT LATE-FLOWERING-like
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03083 Polycomb repressive complex 2
bra03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03250 Viral life cycle - HIV-1 2
vvi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03018 RNA degradation 3
tae04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04148 Efferocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03022 Basal transcription factors 2
ghi03060 Protein export 2
ghi03013 Nucleocytoplasmic transport 2
ghi03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03022 Basal transcription factors 2
ghi03060 Protein export 2
ghi03013 Nucleocytoplasmic transport 2
ghi03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04148 Efferocytosis 2
sbi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03082 ATP-dependent chromatin remodeling 2
sot04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04626 Plant-pathogen interaction 2
nta03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04626 Plant-pathogen interaction 2
nta03420 Nucleotide excision repair 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 843571 100810803 100814582 101257868 4348528 103654689 103831748 103852779 100265246 18094701 7475675 11434056 25502289 123180830 123042372 123428286 107906063 107958373 106433048 106354212 8067871 102598206 102613498 100825324 107806008 107828181
The preparation time of this page was 0.1 [sec].