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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7475684   linoleate 13S-lipoxygenase 3-1, chloroplastic 
 ppo-r.4   7475684   linoleate 13S-lipoxygenase 3-1, chloroplastic 
 ppo-u.5   7494782   lipoxygenase 6, chloroplastic 
 ppo-u.5   7477038   lipoxygenase 6, chloroplastic 
 ppo-u.5   18094717   linoleate 13S-lipoxygenase 3-1, chloroplastic 
 gma-u.5   100814410   lipoxygenase 6, chloroplastic 
 gma-u.5   100817322   linoleate 13S-lipoxygenase 3-1, chloroplastic 
 gma-u.5   100785480   lipoxygenase 3, chloroplastic 
 mtr-u.5   25501722   lipoxygenase 6, chloroplastic 
 mtr-u.5   11430427   linoleate 13S-lipoxygenase 3-1, chloroplastic 
 ath-u.5   LOX3   lipoxygenase 3 
 ath-u.5   LOX6   PLAT/LH2 domain-containing lipoxygenase family protein 
 ath-u.5   LOX4   PLAT/LH2 domain-containing lipoxygenase family protein 
 vvi-u.5   100244202   lipoxygenase 6, chloroplastic 
 vvi-u.5   LOXO   lipoxygenase 
 sly-u.5   101263024   lipoxygenase 6, chloroplastic 
 sly-u.5   loxD   linoleate 13S-lipoxygenase 3-1, chloroplastic 
 osa-u.5   4331824   probable lipoxygenase 6 
 osa-u.5   9267158   putative lipoxygenase 5 
 zma-u.5   ts1   tasselseed1 
 zma-u.5   lox7   linoleate 13S-lipoxygenase7 
 zma-u.5   lox9   linoleate 13S-lipoxygenase9 

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Top 50 coexpressed genes to 7475684 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7475684 (ppo-u.5 coexpression data)

CoexMap"7475684"


ppoLOC7475684 | Entrez gene ID : 7475684    
Species ppo gma mtr ath vvi sly osa zma tae hvu ghi bdi cit bra cre sbi bna nta sot
Paralog 5 3 2 3 2 2 2 3 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG pop00591 [list] [network] Linoleic acid metabolism (21 genes)
pop00592 [list] [network] alpha-Linolenic acid metabolism (75 genes)
GO BP
GO:0034440 [list] [network] lipid oxidation  (46 genes)  IEA  
GO CC
GO MF
GO:0016702 [list] [network] oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen  (54 genes)  IEA  
GO:0046872 [list] [network] metal ion binding  (2135 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4916 genes)  IEA  
Protein XP_052307579.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 9,  chlo 1,  golg 1  (predict for XP_052307579.1)
Subcellular
localization
TargetP
other 5,  chlo 4  (predict for XP_052307579.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7475684

.
ppo-r.4
for
7475684

.
ppo-u.5
for
7494782

.
ppo-u.5
for
7477038

.
ppo-u.5
for
18094717

.
gma-u.5
for
100814410

.
gma-u.5
for
100817322

.
gma-u.5
for
100785480

.
mtr-u.5
for
25501722

.
mtr-u.5
for
11430427

.
ath-u.5
for
LOX3

.
ath-u.5
for
LOX6

.
ath-u.5
for
LOX4

.
vvi-u.5
for
100244202

.
vvi-u.5
for
LOXO

.
sly-u.5
for
101263024

.
sly-u.5
for
loxD

.
osa-u.5
for
4331824

.
osa-u.5
for
9267158

.
zma-u.5
for
ts1

.
zma-u.5
for
lox7

.
zma-u.5
for
lox9

.


Ortholog ID: 1772
Species ath ath gma gma sly sly osa osa zma zma bra bra vvi ppo ppo mtr mtr tae tae hvu hvu ghi ghi bna bna sbi sbi sot sot cit cit bdi bdi nta nta
Symbol LOX4 LOX6 LOC100793614 LOC100811820 loxD LOC101263024 LOC4331824 LOC9267158 lox9 lox7 LOC103835956 LOC103852410 LOC100244202 LOC7477038 LOC18094717 LOC25501722 LOC11430427 LOC123098654 LOC123189338 LOC123449608 LOC123426843 LOC121230896 LOC107886453 LOC125585696 LOC106358574 LOC8065835 LOC8082015 LOC102597498 LOC102583480 LOC102620930 LOC102622489 LOC100831197 LOC100829163 LOC107814671 LOC107820064
Function* PLAT/LH2 domain-containing lipoxygenase family protein PLAT/LH2 domain-containing lipoxygenase family protein linoleate 13S-lipoxygenase 3-1, chloroplastic linoleate 13S-lipoxygenase 3-1, chloroplastic linoleate 13S-lipoxygenase 3-1, chloroplastic lipoxygenase 6, chloroplastic probable lipoxygenase 6 putative lipoxygenase 5 linoleate 13S-lipoxygenase9 linoleate 13S-lipoxygenase7 lipoxygenase 3, chloroplastic lipoxygenase 6, chloroplastic lipoxygenase 6, chloroplastic lipoxygenase 6, chloroplastic linoleate 13S-lipoxygenase 3-1, chloroplastic lipoxygenase 6, chloroplastic linoleate 13S-lipoxygenase 3-1, chloroplastic probable lipoxygenase 6 putative lipoxygenase 5 probable lipoxygenase 6 putative lipoxygenase 5 linoleate 13S-lipoxygenase 3-1, chloroplastic lipoxygenase 6, chloroplastic lipoxygenase 6, chloroplastic-like lipoxygenase 3, chloroplastic putative lipoxygenase 5 probable lipoxygenase 6 linoleate 13S-lipoxygenase 3-1, chloroplastic-like lipoxygenase 6, chloroplastic-like lipoxygenase 6, chloroplastic linoleate 13S-lipoxygenase 3-1, chloroplastic-like putative lipoxygenase 5 probable lipoxygenase 6 linoleate 13S-lipoxygenase 3-1, chloroplastic lipoxygenase 6, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00592 alpha-Linolenic acid metabolism 5
ath04075 Plant hormone signal transduction 5
ath00591 Linoleic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00460 Cyanoamino acid metabolism 2
ath00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04626 Plant-pathogen interaction 2
gma00591 Linoleic acid metabolism 2
gma00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00591 Linoleic acid metabolism 2
gma00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 4
sly00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00592 alpha-Linolenic acid metabolism 4
osa00280 Valine, leucine and isoleucine degradation 2
osa04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 2
osa00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01200 Carbon metabolism 3
zma04070 Phosphatidylinositol signaling system 3
zma00591 Linoleic acid metabolism 2
zma00562 Inositol phosphate metabolism 2
zma00670 One carbon pool by folate 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00592 alpha-Linolenic acid metabolism 5
zma00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
zma01230 Biosynthesis of amino acids 2
zma00591 Linoleic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00592 alpha-Linolenic acid metabolism 6
bra04075 Plant hormone signal transduction 5
bra00591 Linoleic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04626 Plant-pathogen interaction 4
bra04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04016 MAPK signaling pathway - plant 2
vvi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00591 Linoleic acid metabolism 3
ppo00592 alpha-Linolenic acid metabolism 2
ppo00900 Terpenoid backbone biosynthesis 2
ppo04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00592 alpha-Linolenic acid metabolism 2
ppo04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00196 Photosynthesis - antenna proteins 3
mtr00500 Starch and sucrose metabolism 3
mtr01200 Carbon metabolism 3
mtr00195 Photosynthesis 2
mtr00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04626 Plant-pathogen interaction 5
mtr04016 MAPK signaling pathway - plant 4
mtr04075 Plant hormone signal transduction 4
mtr00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00591 Linoleic acid metabolism 3
tae00592 alpha-Linolenic acid metabolism 3
tae04626 Plant-pathogen interaction 3
tae03060 Protein export 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04016 MAPK signaling pathway - plant 3
tae04626 Plant-pathogen interaction 3
tae00591 Linoleic acid metabolism 3
tae00592 alpha-Linolenic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00940 Phenylpropanoid biosynthesis 6
hvu00941 Flavonoid biosynthesis 3
hvu00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 3
hvu00360 Phenylalanine metabolism 3
hvu00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00940 Phenylpropanoid biosynthesis 3
hvu00360 Phenylalanine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04082 Neuroactive ligand signaling 4
ghi00591 Linoleic acid metabolism 2
ghi00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00591 Linoleic acid metabolism 3
ghi00592 alpha-Linolenic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00591 Linoleic acid metabolism 4
bna00592 alpha-Linolenic acid metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00591 Linoleic acid metabolism 6
bna00592 alpha-Linolenic acid metabolism 6
bna04075 Plant hormone signal transduction 4
bna04626 Plant-pathogen interaction 4
bna00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04626 Plant-pathogen interaction 3
sot04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00592 alpha-Linolenic acid metabolism 5
sot00591 Linoleic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00591 Linoleic acid metabolism 2
nta00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00592 alpha-Linolenic acid metabolism 5
nta04075 Plant hormone signal transduction 4
nta00591 Linoleic acid metabolism 3
nta00071 Fatty acid degradation 2
nta00410 beta-Alanine metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 843584 843077 100793614 100811820 544009 101263024 4331824 9267158 100037806 100037807 103835956 103852410 100244202 7477038 18094717 25501722 11430427 123098654 123189338 123449608 123426843 121230896 107886453 125585696 106358574 8065835 8082015 102597498 102583480 102620930 102622489 100831197 100829163 107814671 107820064
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