ATTED-II : GeneCoexpression result

Species	Gene	Description
ppo-u.5	7475709	F-box only protein 6
ppo-r.4	7475709	F-box only protein 6
ppo-m.4	7475709	F-box only protein 6
gma-u.5	100783227	F-box only protein 6
gma-u.5	100791173	F-box only protein 6
mtr-u.5	25491326	F-box/kelch-repeat protein At5g15710
vvi-u.5	100854446	F-box/kelch-repeat protein At5g15710
ghi-r.1	107940960	F-box/kelch-repeat protein At3g61590
cit-r.1	102608164	hypothetical protein
sly-u.5	101244758	F-box protein At5g49610
sot-r.1	102593651	F-box protein At5g49610-like
nta-r.1	107814691	F-box only protein 6-like
nta-r.1	107823960	F-box protein At5g49610-like

functional annotation

KEGG

GO BP

GO CC

GO MF

GO:0005515 [list] [network] protein binding

(4916 genes)

IEA

Protein

XP_002304150.3 [sequence] [blastp]

Subcellular
localization
wolf

chlo 6, cyto 2, nucl 1, mito 1, plas 1, nucl_plas 1, mito_plas 1

(predict for XP_002304150.3)

Subcellular
localization
TargetP

mito 3

(predict for XP_002304150.3)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ppo-u.5 for 7475709	ppo-r.4 for 7475709	ppo-m.4 for 7475709	gma-u.5 for 100783227	gma-u.5 for 100791173	mtr-u.5 for 25491326	vvi-u.5 for 100854446	ghi-r.1 for 107940960	cit-r.1 for 102608164	sly-u.5 for 101244758	sot-r.1 for 102593651	nta-r.1 for 107814691	nta-r.1 for 107823960

Ortholog ID: 14546

Species

ppo

gma

mtr

vvi

ghi

cit

sly

sot

nta

Symbol

Function^*

F-box only protein 6

F-box/kelch-repeat protein At5g15710

F-box/kelch-repeat protein At3g61590

hypothetical protein

F-box protein At5g49610

F-box protein At5g49610-like

F-box only protein 6-like

F-box protein At5g49610-like

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00030	Pentose phosphate pathway	4
gma00480	Glutathione metabolism	4
gma01200	Carbon metabolism	4
gma04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04712	Circadian rhythm - plant	5
gma00030	Pentose phosphate pathway	2
gma00480	Glutathione metabolism	2
gma01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00860	Porphyrin metabolism	2
mtr01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00240	Pyrimidine metabolism	2
nta01232	Nucleotide metabolism	2
nta00250	Alanine, aspartate and glutamate metabolism	2
nta00260	Glycine, serine and threonine metabolism	2
nta00270	Cysteine and methionine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00250	Alanine, aspartate and glutamate metabolism	2
nta00260	Glycine, serine and threonine metabolism	2
nta00270	Cysteine and methionine metabolism	2
nta00280	Valine, leucine and isoleucine degradation	2
nta00630	Glyoxylate and dicarboxylate metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

7475709

100783227

100791173

25491326

100854446

107940960

102608164

101244758

102593651

107814691

107823960

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 7475709 (ppo-u.5 coexpression data)

Top 50 enrichment test to 7475709 (ppo-u.5 coexpression data)


Species	ppo	gma	mtr	vvi	ghi	cit	sly	sot	nta	osa	hvu	ath	cre	tae	zma	bdi	sbi	bra	bna
Paralog	3	2	1	1	1	1	1	1	2	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 7475709 (ppo-u.5 coexpression data)

Top 50 enrichment test to 7475709 (ppo-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**