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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7475934   AP-5 complex subunit mu 
 ppo-r.4   7475934   AP-5 complex subunit mu 
 ppo-m.4   7475934   AP-5 complex subunit mu 
 gma-u.5   100813540   AP-5 complex subunit mu 
 mtr-u.5   25494057   AP-5 complex subunit mu 
 ath-u.5   AT2G20790   clathrin adaptor complexes medium subunit family protein 
 vvi-u.5   100259662   AP-5 complex subunit mu 
 sly-u.5   101265277   AP-5 complex subunit mu 
 osa-u.5   4352391   AP-5 complex subunit mu 
 zma-u.5   100281080   adaptor complexes medium subunit family protein 

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Top 50 coexpressed genes to 7475934 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7475934 (ppo-u.5 coexpression data)

CoexMap"7475934"


ppoLOC7475934 | Entrez gene ID : 7475934    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 3 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0016197 [list] [network] endosomal transport  (91 genes)  IEA  
GO CC
GO:0030119 [list] [network] AP-type membrane coat adaptor complex  (28 genes)  IEA  
GO:0005770 [list] [network] late endosome  (44 genes)  IEA  
GO:0005764 [list] [network] lysosome  (63 genes)  IEA  
GO:0005829 [list] [network] cytosol  (1141 genes)  IEA  
GO MF
Protein XP_002314429.4 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  nucl 1,  mito 1  (predict for XP_002314429.4)
Subcellular
localization
TargetP
mito 4  (predict for XP_002314429.4)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7475934

.
ppo-r.4
for
7475934

.
ppo-m.4
for
7475934

.
gma-u.5
for
100813540

.
mtr-u.5
for
25494057

.
ath-u.5
for
AT2G20790

.
vvi-u.5
for
100259662

.
sly-u.5
for
101265277

.
osa-u.5
for
4352391

.
zma-u.5
for
100281080

.


Ortholog ID: 11651
Species ath gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna sbi cit bdi nta nta
Symbol AT2G20790 LOC100813540 LOC101265277 LOC4352391 LOC100281080 LOC103856221 LOC100259662 LOC7475934 LOC25494057 LOC123110848 LOC123102665 LOC123395952 LOC107926541 LOC107929151 LOC125594899 LOC106386233 LOC8064621 LOC102630193 LOC100842885 LOC107820885 LOC107760083
Function* clathrin adaptor complexes medium subunit family protein AP-5 complex subunit mu AP-5 complex subunit mu AP-5 complex subunit mu adaptor complexes medium subunit family protein AP-5 complex subunit mu AP-5 complex subunit mu AP-5 complex subunit mu AP-5 complex subunit mu AP-5 complex subunit mu AP-5 complex subunit mu AP-5 complex subunit mu AP-5 complex subunit mu AP-5 complex subunit mu AP-5 complex subunit mu AP-5 complex subunit mu AP-5 complex subunit mu AP-5 complex subunit mu AP-5 complex subunit mu AP-5 complex subunit mu AP-5 complex subunit mu
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04142 Lysosome 3
ath04144 Endocytosis 2
ath05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 2
gma00510 N-Glycan biosynthesis 2
gma00513 Various types of N-glycan biosynthesis 2
gma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03018 RNA degradation 3
bra04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00520 Amino sugar and nucleotide sugar metabolism 2
vvi04382 Cornified envelope formation 2
vvi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04712 Circadian rhythm - plant 5
ppo04141 Protein processing in endoplasmic reticulum 3
ppo03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 3
mtr03050 Proteasome 3
mtr03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03083 Polycomb repressive complex 2
ghi03250 Viral life cycle - HIV-1 2
ghi00564 Glycerophospholipid metabolism 2
ghi00565 Ether lipid metabolism 2
ghi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03083 Polycomb repressive complex 2
ghi03250 Viral life cycle - HIV-1 2
ghi00564 Glycerophospholipid metabolism 2
ghi00565 Ether lipid metabolism 2
ghi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 4
bna00540 Lipopolysaccharide biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00970 Aminoacyl-tRNA biosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 3
nta03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 816608 100813540 101265277 4352391 100281080 103856221 100259662 7475934 25494057 123110848 123102665 123395952 107926541 107929151 125594899 106386233 8064621 102630193 100842885 107820885 107760083
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