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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7476648   protein REVERSION-TO-ETHYLENE SENSITIVITY1 
 ppo-r.4   7476648   protein REVERSION-TO-ETHYLENE SENSITIVITY1 
 ppo-m.4   7476648   protein REVERSION-TO-ETHYLENE SENSITIVITY1 
 ppo-u.5   7480152   protein RTE1-HOMOLOG 
 ppo-u.5   7470704   protein REVERSION-TO-ETHYLENE SENSITIVITY1 
 gma-u.5   100527909   uncharacterized LOC100527909 
 gma-u.5   100779664   transmembrane protein 222-like 
 gma-u.5   100786957   transmembrane protein 222-like 
 mtr-u.5   11412169   protein RTE1-HOMOLOG 
 mtr-u.5   11418141   protein REVERSION-TO-ETHYLENE SENSITIVITY1 
 ath-u.5   RTE1   protein REVERSION-TO-ETHYLENE SENSITIVITY-like protein (DUF778) 
 ath-u.5   RTH   RTE1-homolog 
 bra-r.6   103872640   protein RTE1-HOMOLOG 
 bra-r.6   103842162   protein REVERSION-TO-ETHYLENE SENSITIVITY1 
 vvi-u.5   100250722   protein REVERSION-TO-ETHYLENE SENSITIVITY1 
 vvi-u.5   100259075   protein RTE1-HOMOLOG 
 ghi-r.1   107897613   protein RTE1-HOMOLOG 
 ghi-r.1   107913034   protein RTE1-HOMOLOG 
 ghi-r.1   107914285   protein RTE1-HOMOLOG 
 bna-r.1   106368544   protein REVERSION-TO-ETHYLENE SENSITIVITY1 
 bna-r.1   106391068   protein RTE1-HOMOLOG-like 
 bna-r.1   106412070   protein REVERSION-TO-ETHYLENE SENSITIVITY1-like 
 cit-r.1   102629175   protein REVERSION-TO-ETHYLENE SENSITIVITY1 
 cit-r.1   102624932   protein RTE1-HOMOLOG 
 sly-u.5   778262   green ripe 
 sly-u.5   778264   green ripe-like 1 
 sly-u.5   778265   green ripe-like 2 
 sot-r.1   102577924   green ripe-like 1 
 sot-r.1   102598150   protein RTE1-HOMOLOG 
 nta-r.1   142171544   protein RTE1-HOMOLOG-like 
 nta-r.1   107822704   protein REVERSION-TO-ETHYLENE SENSITIVITY1 
 nta-r.1   107810780   protein REVERSION-TO-ETHYLENE SENSITIVITY1-like 
 osa-u.5   4339461   protein REVERSION-TO-ETHYLENE SENSITIVITY1 
 osa-u.5   4334443   protein RTE1-HOMOLOG 
 osa-u.5   4325934   protein REVERSION-TO-ETHYLENE SENSITIVITY1 
 zma-u.5   100278855   reversion-to-ethylene sensitivity1 like1 
 zma-u.5   100276900   uncharacterized LOC100276900 
 zma-u.5   100276634   reversion-to-ethylene sensitivity1 like3 
 tae-r.2   123078831   protein REVERSION-TO-ETHYLENE SENSITIVITY1 
 tae-r.2   123061739   protein REVERSION-TO-ETHYLENE SENSITIVITY1 
 tae-r.2   123070374   protein REVERSION-TO-ETHYLENE SENSITIVITY1 
 hvu-r.1   123452768   protein RTE1-HOMOLOG 
 hvu-r.1   123444254   protein REVERSION-TO-ETHYLENE SENSITIVITY1 
 sbi-r.1   8059174   protein REVERSION-TO-ETHYLENE SENSITIVITY1 
 sbi-r.1   110430341   protein REVERSION-TO-ETHYLENE SENSITIVITY1-like 
 sbi-r.1   8081240   protein RTE1-HOMOLOG 
 bdi-r.1   100846409   protein REVERSION-TO-ETHYLENE SENSITIVITY1 
 cre-r.1   CHLRE_12g540750v5   uncharacterized protein 

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Top 50 coexpressed genes to 7476648 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7476648 (ppo-u.5 coexpression data)

CoexMap"7476648"


ppoLOC7476648 | Entrez gene ID : 7476648    
Species ppo gma mtr ath bra vvi ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 5 3 2 2 2 2 3 3 2 3 2 3 3 3 3 2 3 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG pop04016 [list] [network] MAPK signaling pathway - plant (198 genes)
GO BP
GO:0010104 [list] [network] regulation of ethylene-activated signaling pathway  (9 genes)  IEA  
GO:0009723 [list] [network] response to ethylene  (95 genes)  IEA  
GO CC
GO:0005794 [list] [network] Golgi apparatus  (593 genes)  IEA  
GO:0005783 [list] [network] endoplasmic reticulum  (618 genes)  IEA  
GO MF
Protein XP_052305186.1 [sequence] [blastp]
XP_052305187.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  cyto 3,  chlo 1,  mito 1,  vacu 1,  E.R. 1,  golg 1,  chlo_mito 1,  E.R._vacu 1  (predict for XP_052305186.1)
nucl 4,  cyto 3,  chlo 1,  mito 1,  vacu 1,  E.R. 1,  golg 1,  chlo_mito 1,  E.R._vacu 1  (predict for XP_052305187.1)
Subcellular
localization
TargetP
other 7  (predict for XP_052305186.1)
other 7  (predict for XP_052305187.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7476648
ppo-r.4
for
7476648
ppo-m.4
for
7476648
ppo-u.5
for
7480152
ppo-u.5
for
7470704
gma-u.5
for
100527909
gma-u.5
for
100779664
gma-u.5
for
100786957
mtr-u.5
for
11412169
mtr-u.5
for
11418141
ath-u.5
for
RTE1
ath-u.5
for
RTH
bra-r.6
for
103872640
bra-r.6
for
103842162
vvi-u.5
for
100250722
vvi-u.5
for
100259075
ghi-r.1
for
107897613
ghi-r.1
for
107913034
ghi-r.1
for
107914285
bna-r.1
for
106368544
bna-r.1
for
106391068
bna-r.1
for
106412070
cit-r.1
for
102629175
cit-r.1
for
102624932
sly-u.5
for
778262
sly-u.5
for
778264
sly-u.5
for
778265
sot-r.1
for
102577924
sot-r.1
for
102598150
nta-r.1
for
142171544
nta-r.1
for
107822704
nta-r.1
for
107810780
osa-u.5
for
4339461
osa-u.5
for
4334443
osa-u.5
for
4325934
zma-u.5
for
100278855
zma-u.5
for
100276900
zma-u.5
for
100276634
tae-r.2
for
123078831
tae-r.2
for
123061739
tae-r.2
for
123070374
hvu-r.1
for
123452768
hvu-r.1
for
123444254
sbi-r.1
for
8059174
sbi-r.1
for
110430341
sbi-r.1
for
8081240
bdi-r.1
for
100846409
cre-r.1
for
CHLRE_12g540750v5


Ortholog ID: 2388
Species ppo ppo ppo gma gma gma mtr mtr ath ath bra bra vvi vvi ghi ghi ghi bna bna bna cit cit sly sly sly sot sot nta nta nta osa osa osa zma zma zma tae tae tae hvu hvu sbi sbi sbi bdi cre
Symbol LOC7476648 LOC7480152 LOC7470704 LOC100527909 LOC100779664 LOC100786957 LOC11412169 LOC11418141 RTE1 RTH LOC103872640 LOC103842162 LOC100250722 LOC100259075 LOC107897613 LOC107914285 LOC121204797 LOC106368544 LOC106391068 LOC106412070 LOC102629175 LOC102624932 LOC778262 LOC778264 LOC778265 LOC102577924 LOC102598150 LOC107818076 LOC107831598 LOC142172988 LOC4339461 LOC4334443 LOC4325934 LOC100278855 LOC100276634 LOC100193900 LOC123070374 LOC123113736 LOC123123248 LOC123452768 LOC123444254 LOC8059174 LOC110430341 LOC8081240 LOC100846409 CHLRE_12g540750v5
Function* protein REVERSION-TO-ETHYLENE SENSITIVITY1 protein RTE1-HOMOLOG protein REVERSION-TO-ETHYLENE SENSITIVITY1 uncharacterized LOC100527909 transmembrane protein 222-like transmembrane protein 222-like protein RTE1-HOMOLOG protein REVERSION-TO-ETHYLENE SENSITIVITY1 protein REVERSION-TO-ETHYLENE SENSITIVITY-like protein (DUF778) RTE1-homolog protein RTE1-HOMOLOG protein REVERSION-TO-ETHYLENE SENSITIVITY1 protein REVERSION-TO-ETHYLENE SENSITIVITY1 protein RTE1-HOMOLOG protein RTE1-HOMOLOG protein RTE1-HOMOLOG protein REVERSION-TO-ETHYLENE SENSITIVITY1 protein REVERSION-TO-ETHYLENE SENSITIVITY1 protein RTE1-HOMOLOG-like protein REVERSION-TO-ETHYLENE SENSITIVITY1-like protein REVERSION-TO-ETHYLENE SENSITIVITY1 protein RTE1-HOMOLOG green ripe green ripe-like 1 green ripe-like 2 green ripe-like 1 protein RTE1-HOMOLOG protein RTE1-HOMOLOG protein REVERSION-TO-ETHYLENE SENSITIVITY1 protein REVERSION-TO-ETHYLENE SENSITIVITY1-like protein REVERSION-TO-ETHYLENE SENSITIVITY1 protein RTE1-HOMOLOG protein REVERSION-TO-ETHYLENE SENSITIVITY1 reversion-to-ethylene sensitivity1 like1 reversion-to-ethylene sensitivity1 like3 uncharacterized LOC100193900 protein REVERSION-TO-ETHYLENE SENSITIVITY1 protein RTE1-HOMOLOG protein RTE1-HOMOLOG protein RTE1-HOMOLOG protein REVERSION-TO-ETHYLENE SENSITIVITY1 protein REVERSION-TO-ETHYLENE SENSITIVITY1 protein REVERSION-TO-ETHYLENE SENSITIVITY1-like protein RTE1-HOMOLOG protein REVERSION-TO-ETHYLENE SENSITIVITY1 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04016 MAPK signaling pathway - plant 5
ppo04075 Plant hormone signal transduction 2
ppo03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04016 MAPK signaling pathway - plant 11
ppo04075 Plant hormone signal transduction 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04016 MAPK signaling pathway - plant 9
gma04075 Plant hormone signal transduction 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04016 MAPK signaling pathway - plant 3
mtr03015 mRNA surveillance pathway 2
mtr04136 Autophagy - other 2
mtr04382 Cornified envelope formation 2
mtr04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04016 MAPK signaling pathway - plant 7
mtr04075 Plant hormone signal transduction 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04016 MAPK signaling pathway - plant 6
ath04075 Plant hormone signal transduction 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04016 MAPK signaling pathway - plant 7
bra04075 Plant hormone signal transduction 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04016 MAPK signaling pathway - plant 8
vvi04075 Plant hormone signal transduction 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04814 Motor proteins 4
ghi04016 MAPK signaling pathway - plant 2
ghi00541 Biosynthesis of various nucleotide sugars 2
ghi01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04814 Motor proteins 4
ghi04016 MAPK signaling pathway - plant 2
ghi00541 Biosynthesis of various nucleotide sugars 2
ghi01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04016 MAPK signaling pathway - plant 12
ghi04075 Plant hormone signal transduction 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00071 Fatty acid degradation 6
bna00280 Valine, leucine and isoleucine degradation 6
bna00592 alpha-Linolenic acid metabolism 6
bna01040 Biosynthesis of unsaturated fatty acids 6
bna01212 Fatty acid metabolism 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00600 Sphingolipid metabolism 4
bna00966 Glucosinolate biosynthesis 3
bna01210 2-Oxocarboxylic acid metabolism 3
bna03030 DNA replication 2
bna03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00071 Fatty acid degradation 6
bna00280 Valine, leucine and isoleucine degradation 6
bna00592 alpha-Linolenic acid metabolism 6
bna01040 Biosynthesis of unsaturated fatty acids 6
bna01212 Fatty acid metabolism 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04016 MAPK signaling pathway - plant 6
cit04075 Plant hormone signal transduction 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00071 Fatty acid degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03030 DNA replication 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04016 MAPK signaling pathway - plant 3
sly04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03018 RNA degradation 3
sly03040 Spliceosome 3
sly03020 RNA polymerase 2
sly03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04016 MAPK signaling pathway - plant 10
sot04075 Plant hormone signal transduction 8
sot00270 Cysteine and methionine metabolism 2
sot00460 Cyanoamino acid metabolism 2
sot00920 Sulfur metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04016 MAPK signaling pathway - plant 2
nta04081 Hormone signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04016 MAPK signaling pathway - plant 11
nta04075 Plant hormone signal transduction 9
nta00730 Thiamine metabolism 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04016 MAPK signaling pathway - plant 11
nta04075 Plant hormone signal transduction 9
nta00730 Thiamine metabolism 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04016 MAPK signaling pathway - plant 5
osa04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04016 MAPK signaling pathway - plant 4
osa04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04016 MAPK signaling pathway - plant 6
zma04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04016 MAPK signaling pathway - plant 5
zma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 6
zma04016 MAPK signaling pathway - plant 4
zma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04016 MAPK signaling pathway - plant 14
tae04075 Plant hormone signal transduction 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03020 RNA polymerase 4
tae03420 Nucleotide excision repair 4
tae03050 Proteasome 4
tae03040 Spliceosome 3
tae04016 MAPK signaling pathway - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03050 Proteasome 8
tae04016 MAPK signaling pathway - plant 3
tae03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00190 Oxidative phosphorylation 4
hvu03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04016 MAPK signaling pathway - plant 4
hvu04075 Plant hormone signal transduction 4
hvu03060 Protein export 2
hvu04130 SNARE interactions in vesicular transport 2
hvu04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04016 MAPK signaling pathway - plant 5
sbi01200 Carbon metabolism 5
sbi00710 Carbon fixation by Calvin cycle 4
sbi01230 Biosynthesis of amino acids 4
sbi00010 Glycolysis / Gluconeogenesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04016 MAPK signaling pathway - plant 6
sbi04075 Plant hormone signal transduction 3
sbi00010 Glycolysis / Gluconeogenesis 2
sbi00620 Pyruvate metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 7476648 7480152 7470704 100527909 100779664 100786957 11412169 11418141 817148 824268 103872640 103842162 100250722 100259075 107897613 107914285 121204797 106368544 106391068 106412070 102629175 102624932 778262 778264 778265 102577924 102598150 107818076 107831598 142172988 4339461 4334443 4325934 100278855 100276634 100193900 123070374 123113736 123123248 123452768 123444254 8059174 110430341 8081240 100846409 5719493
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