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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7476687   protein TIFY 3 
 ppo-r.4   7476687   protein TIFY 3 
 ppo-m.4   7476687   protein TIFY 3 
 ppo-u.5   7492276   protein TIFY 3 
 gma-u.5   100306655   CCT and tify domains-containing protein 
 gma-u.5   100306524   uncharacterized LOC100306524 
 gma-u.5   100306045   uncharacterized LOC100306045 
 mtr-u.5   11438170   protein TIFY 3B 
 mtr-u.5   11425404   protein TIFY 3 
 ath-u.5   JAZ11   jasmonate-zim-domain protein 11 
 ath-u.5   JAZ12   jasmonate-zim-domain protein 12 
 vvi-u.5   100244072   protein TIFY 10A 
 sly-u.5   101257414   protein SlTIFY3/SlJAZ13 
 osa-u.5   4337240   protein TIFY 3-like 
 zma-u.5   103626102   protein TIFY 3 
 zma-u.5   100384736   uncharacterized LOC100384736 
 zma-u.5   100383759   uncharacterized LOC100383759 

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Top 50 coexpressed genes to 7476687 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7476687 (ppo-u.5 coexpression data)

CoexMap"7476687"


ppoLOC7476687 | Entrez gene ID : 7476687    
Species ppo gma mtr ath vvi sly osa zma tae hvu ghi bdi cit bra cre sbi bna nta sot
Paralog 4 3 2 2 1 1 1 3 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG pop04075 [list] [network] Plant hormone signal transduction (517 genes)
GO BP
GO:0009611 [list] [network] response to wounding  (21 genes)  IEA  
GO:2000022 [list] [network] regulation of jasmonic acid mediated signaling pathway  (24 genes)  IEA  
GO:0031347 [list] [network] regulation of defense response  (31 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (3662 genes)  IEA  
GO MF
Protein XP_002324786.1 [sequence] [blastp]
XP_024445267.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for XP_002324786.1)
cyto 4,  nucl 4,  chlo 2,  cyto_pero 2,  cyto_E.R. 2,  cyto_plas 2  (predict for XP_024445267.1)
Subcellular
localization
TargetP
other 9  (predict for XP_002324786.1)
other 9  (predict for XP_024445267.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7476687

.
ppo-r.4
for
7476687

.
ppo-m.4
for
7476687

.
ppo-u.5
for
7492276

.
gma-u.5
for
100306655

.
gma-u.5
for
100306524

.
gma-u.5
for
100306045

.
mtr-u.5
for
11438170

.
mtr-u.5
for
11425404

.
ath-u.5
for
JAZ11

.
ath-u.5
for
JAZ12

.
vvi-u.5
for
100244072

.
sly-u.5
for
101257414

.
osa-u.5
for
4337240

.
zma-u.5
for
103626102

.
zma-u.5
for
100384736

.
zma-u.5
for
100383759

.


Ortholog ID: 4568
Species ath ath gma gma sly osa zma zma bra bra vvi ppo ppo mtr mtr tae tae hvu ghi ghi bna sbi sot cit bdi
Symbol JAZ11 JAZ12 LOC100306524 LOC100306282 LOC101257414 LOC4337240 LOC100383759 LOC103638584 LOC103845633 LOC103851386 LOC100244072 LOC7492276 LOC7476687 LOC11438170 LOC11425404 LOC123054890 LOC100125739 LOC123428100 LOC107958809 LOC107929923 LOC106371706 LOC8079603 LOC102598506 LOC102629841 LOC100840384
Function* jasmonate-zim-domain protein 11 jasmonate-zim-domain protein 12 uncharacterized LOC100306524 CCT motif and tify domain-containing protein protein SlTIFY3/SlJAZ13 protein TIFY 3-like uncharacterized LOC100383759 protein TIFY 3 protein TIFY 3B protein TIFY 3B protein TIFY 10A protein TIFY 3 protein TIFY 3 protein TIFY 3B protein TIFY 3 protein TIFY 3 protein TIFY 3 protein TIFY 3-like protein TIFY 3B protein TIFY 3 protein TIFY 3B-like protein TIFY 3 protein TIFY 3A-like protein TIFY 3B protein TIFY 3
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 7
osa00592 alpha-Linolenic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 2
bra01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04016 MAPK signaling pathway - plant 4
ppo04075 Plant hormone signal transduction 4
ppo00520 Amino sugar and nucleotide sugar metabolism 4
ppo00500 Starch and sucrose metabolism 3
ppo00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 5
ppo04016 MAPK signaling pathway - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04626 Plant-pathogen interaction 2
mtr04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00591 Linoleic acid metabolism 6
mtr00620 Pyruvate metabolism 2
mtr00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 3
tae00330 Arginine and proline metabolism 3
tae00410 beta-Alanine metabolism 3
tae00770 Pantothenate and CoA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01250 Biosynthesis of nucleotide sugars 4
hvu00520 Amino sugar and nucleotide sugar metabolism 3
hvu04145 Phagosome 2
hvu04517 IgSF CAM signaling 2
hvu04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 6
ghi00900 Terpenoid backbone biosynthesis 2
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04075 Plant hormone signal transduction 3
bna04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04075 Plant hormone signal transduction 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01230 Biosynthesis of amino acids 3
cit00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04075 Plant hormone signal transduction 5
bdi00260 Glycine, serine and threonine metabolism 2
bdi00630 Glyoxylate and dicarboxylate metabolism 2
bdi01200 Carbon metabolism 2
bdi01230 Biosynthesis of amino acids 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 823426 832214 100306524 100306282 101257414 4337240 100383759 103638584 103845633 103851386 100244072 7492276 7476687 11438170 11425404 123054890 100125739 123428100 107958809 107929923 106371706 8079603 102598506 102629841 100840384
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