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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5  7476699  ultraviolet-B receptor UVR8 
 ppo-r.4  7476699  ultraviolet-B receptor UVR8 
 gma-u.5  100815199  ultraviolet-B receptor UVR8 
 gma-u.5  100801214  probable E3 ubiquitin-protein ligase HERC4 
 mtr-u.5  25481846  RCC1 and BTB domain-containing protein 2 
 mtr-u.5  11426805  ultraviolet-B receptor UVR8 
 ath-u.5  AT5G11580  Regulator of chromosome condensation (RCC1) family protein 
 vvi-u.5  100261092  ultraviolet-B receptor UVR8 
 sly-u.5  101253214  regulator of chromosome condensation (RCC1) family protein 
 osa-u.5  4324726  ultraviolet-B receptor UVR8 
 zma-u.5  100191992  uncharacterized LOC100191992 

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Top 50 coexpressed genes to 7476699 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7476699 (ppo-u.5 coexpression data)

CoexMap"7476699"


ppoLOC7476699 | Entrez gene ID : 7476699
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 2 2 2 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
Protein XP_024446543.2 [sequence] [blastp]
XP_024446544.2 [sequence] [blastp]
XP_052305152.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  chlo 2,  cyto 1  (predict for XP_024446543.2)
nucl 8,  chlo 1,  cyto 1,  mito 1,  chlo_mito 1  (predict for XP_024446544.2)
nucl 6,  chlo 1,  cysk 1,  cyto 1,  mito 1,  cysk_plas 1  (predict for XP_052305152.1)
Subcellular
localization
TargetP
other 8  (predict for XP_024446543.2)
other 7  (predict for XP_024446544.2)
other 9  (predict for XP_052305152.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

ppo-u.5
for
7476699

.

ppo-r.4
for
7476699

.

gma-u.5
for
100815199

.

gma-u.5
for
100801214

.

mtr-u.5
for
25481846

.

mtr-u.5
for
11426805

.

ath-u.5
for
AT5G11580

.

vvi-u.5
for
100261092

.

sly-u.5
for
101253214

.

osa-u.5
for
4324726

.

zma-u.5
for
100191992

.


Ortholog ID: 10929
Species ath gma gma sly osa zma bra vvi ppo mtr mtr tae tae hvu ghi ghi bna bna sbi sot cit nta nta
Symbol AT5G11580 LOC100815199 LOC100801214 LOC101253214 LOC4324726 LOC100191992 LOC103850781 LOC100261092 LOC7476699 LOC25481846 LOC11426805 LOC123062019 LOC123070724 LOC123444321 LOC107953844 LOC107899831 LOC106383020 LOC106383583 LOC8059208 LOC102591284 LOC102607145 LOC107825192 LOC107783627
Function* Regulator of chromosome condensation (RCC1) family protein ultraviolet-B receptor UVR8 probable E3 ubiquitin-protein ligase HERC4 regulator of chromosome condensation (RCC1) family protein ultraviolet-B receptor UVR8 uncharacterized LOC100191992 ultraviolet-B receptor UVR8 ultraviolet-B receptor UVR8 ultraviolet-B receptor UVR8 RCC1 and BTB domain-containing protein 2 ultraviolet-B receptor UVR8 ultraviolet-B receptor UVR8 ultraviolet-B receptor UVR8 ultraviolet-B receptor UVR8 ultraviolet-B receptor UVR8 ultraviolet-B receptor UVR8 ultraviolet-B receptor UVR8 ultraviolet-B receptor UVR8-like ultraviolet-B receptor UVR8 ultraviolet-B receptor UVR8 ultraviolet-B receptor UVR8 ultraviolet-B receptor UVR8-like ultraviolet-B receptor UVR8
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04142 Lysosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 4
osa04016 MAPK signaling pathway - plant 3
osa00071 Fatty acid degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00280 Valine, leucine and isoleucine degradation 3
zma04146 Peroxisome 2
zma00071 Fatty acid degradation 2
zma01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00280 Valine, leucine and isoleucine degradation 7
tae00920 Sulfur metabolism 3
tae00260 Glycine, serine and threonine metabolism 2
tae01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00280 Valine, leucine and isoleucine degradation 9
tae01210 2-Oxocarboxylic acid metabolism 4
tae00250 Alanine, aspartate and glutamate metabolism 3
tae00260 Glycine, serine and threonine metabolism 3
tae00270 Cysteine and methionine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04136 Autophagy - other 2
hvu04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00280 Valine, leucine and isoleucine degradation 4
ghi00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
ghi00350 Tyrosine metabolism 2
ghi00360 Phenylalanine metabolism 2
ghi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00280 Valine, leucine and isoleucine degradation 5
ghi00330 Arginine and proline metabolism 3
ghi00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
ghi00350 Tyrosine metabolism 2
ghi00360 Phenylalanine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00310 Lysine degradation 3
sbi00410 beta-Alanine metabolism 3
sbi00280 Valine, leucine and isoleucine degradation 3
sbi00640 Propanoate metabolism 3
sbi01210 2-Oxocarboxylic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00260 Glycine, serine and threonine metabolism 3
sot00470 D-Amino acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00310 Lysine degradation 3
cit00010 Glycolysis / Gluconeogenesis 2
cit00053 Ascorbate and aldarate metabolism 2
cit00280 Valine, leucine and isoleucine degradation 2
cit00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00052 Galactose metabolism 3
nta00561 Glycerolipid metabolism 3
nta00600 Sphingolipid metabolism 3
nta00603 Glycosphingolipid biosynthesis - globo and isoglobo series 3
nta00280 Valine, leucine and isoleucine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00052 Galactose metabolism 3
nta00561 Glycerolipid metabolism 3
nta00600 Sphingolipid metabolism 3
nta00603 Glycosphingolipid biosynthesis - globo and isoglobo series 3
nta00280 Valine, leucine and isoleucine degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 831030 100815199 100801214 101253214 4324726 100191992 103850781 100261092 7476699 25481846 11426805 123062019 123070724 123444321 107953844 107899831 106383020 106383583 8059208 102591284 102607145 107825192 107783627
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