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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7477132   small GTPase LIP1 
 ppo-r.4   7477132   small GTPase LIP1 
 ppo-u.5   7456266   small GTPase LIP1 
 gma-u.5   100784826   small GTPase LIP1 
 gma-u.5   100808270   small GTPase LIP1 
 mtr-u.5   11427447   small GTPase LIP1 
 ath-u.5   LIP1   Ras-related small GTP-binding family protein 
 vvi-u.5   100247674   small GTPase LIP1 
 vvi-u.5   100244132   small GTPase LIP1 
 sly-u.5   101258060   small GTPase LIP1 
 osa-u.5   4332217   small GTPase LIP1 
 osa-u.5   4348056   small GTPase LIP1 
 zma-u.5   100194186   uncharacterized LOC100194186 
 zma-u.5   100284549   RAB, member of RAS oncogene family-like 3 

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Top 50 coexpressed genes to 7477132 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7477132 (ppo-u.5 coexpression data)

CoexMap"7477132"


ppoLOC7477132 | Entrez gene ID : 7477132    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 3 2 1 1 2 1 2 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006886 [list] [network] intracellular protein transport  (350 genes)  IEA  
GO CC
GO:0012505 [list] [network] endomembrane system  (1408 genes)  IEA  
GO MF
GO:0003924 [list] [network] GTPase activity  (264 genes)  IEA  
GO:0005525 [list] [network] GTP binding  (290 genes)  IEA  
Protein XP_002307133.2 [sequence] [blastp]
XP_052309358.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 8,  cyto 1,  extr 1,  golg 1  (predict for XP_002307133.2)
nucl 7,  cyto 1,  extr 1,  golg 1,  cyto_pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for XP_052309358.1)
Subcellular
localization
TargetP
other 8  (predict for XP_002307133.2)
other 8  (predict for XP_052309358.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7477132

.
ppo-r.4
for
7477132

.
ppo-u.5
for
7456266

.
gma-u.5
for
100784826

.
gma-u.5
for
100808270

.
mtr-u.5
for
11427447

.
ath-u.5
for
LIP1

.
vvi-u.5
for
100247674

.
vvi-u.5
for
100244132

.
sly-u.5
for
101258060

.
osa-u.5
for
4332217

.
osa-u.5
for
4348056

.
zma-u.5
for
100194186

.
zma-u.5
for
100284549

.


Ortholog ID: 4781
Species ath gma gma sly osa osa zma zma bra bra vvi vvi ppo ppo mtr tae tae hvu hvu ghi ghi bna bna sbi sbi sot cit bdi bdi nta nta
Symbol LIP1 LOC100808270 LOC100784826 LOC101258060 LOC4348056 LOC4332217 LOC100284549 LOC100194186 LOC103837556 LOC103873908 LOC100247674 LOC100244132 LOC7456266 LOC7477132 LOC11427447 LOC123085198 LOC123047581 LOC123433225 LOC123449182 LOC107948876 LOC107948408 LOC125593354 BNAC09G06710D LOC8054359 LOC8083593 LOC102595110 LOC102621135 LOC100843178 LOC100845228 LOC107827248 LOC142167889
Function* Ras-related small GTP-binding family protein small GTPase LIP1 small GTPase LIP1 small GTPase LIP1 small GTPase LIP1 small GTPase LIP1 RAB, member of RAS oncogene family-like 3 uncharacterized LOC100194186 small GTPase LIP1 small GTPase LIP1 small GTPase LIP1 small GTPase LIP1 small GTPase LIP1 small GTPase LIP1 small GTPase LIP1 small GTPase LIP1 small GTPase LIP1 small GTPase LIP1-like small GTPase LIP1-like small GTPase LIP1 small GTPase LIP1 small GTPase LIP1-like small GTPase LIP1 small GTPase LIP1 small GTPase LIP1 uncharacterized GTP-binding protein At5g64813 small GTPase LIP1 small GTPase LIP1 small GTPase LIP1 small GTPase LIP1-like small GTPase LIP1-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03015 mRNA surveillance pathway 2
ath04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03015 mRNA surveillance pathway 3
bra04382 Cornified envelope formation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03018 RNA degradation 2
bra00600 Sphingolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03050 Proteasome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01250 Biosynthesis of nucleotide sugars 5
vvi00541 Biosynthesis of various nucleotide sugars 4
vvi00520 Amino sugar and nucleotide sugar metabolism 2
vvi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04144 Endocytosis 3
ppo03015 mRNA surveillance pathway 2
ppo00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00190 Oxidative phosphorylation 3
ppo03050 Proteasome 2
ppo04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04712 Circadian rhythm - plant 2
mtr00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00190 Oxidative phosphorylation 9
tae04145 Phagosome 9
tae04142 Lysosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04141 Protein processing in endoplasmic reticulum 4
hvu04144 Endocytosis 3
hvu03060 Protein export 2
hvu03083 Polycomb repressive complex 2
hvu04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04145 Phagosome 2
hvu04517 IgSF CAM signaling 2
hvu04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00520 Amino sugar and nucleotide sugar metabolism 2
ghi01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00190 Oxidative phosphorylation 3
sbi04145 Phagosome 3
sbi04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00520 Amino sugar and nucleotide sugar metabolism 4
sot00053 Ascorbate and aldarate metabolism 3
sot01240 Biosynthesis of cofactors 3
sot01250 Biosynthesis of nucleotide sugars 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 836603 100808270 100784826 101258060 4348056 4332217 100284549 100194186 103837556 103873908 100247674 100244132 7456266 7477132 11427447 123085198 123047581 123433225 123449182 107948876 107948408 125593354 106416239 8054359 8083593 102595110 102621135 100843178 100845228 107827248 142167889
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