Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7477189   putative pentatricopeptide repeat-containing protein At1g74580 
 ppo-r.4   7477189   putative pentatricopeptide repeat-containing protein At1g74580 
 ppo-m.4   7477189   putative pentatricopeptide repeat-containing protein At1g74580 
 gma-u.5   100811379   putative pentatricopeptide repeat-containing protein At1g74580 
 mtr-u.5   25493815   putative pentatricopeptide repeat-containing protein At1g74580 
 ath-u.5   AT1G74580   Pentatricopeptide repeat (PPR) superfamily protein 
 vvi-u.5   100253631   putative pentatricopeptide repeat-containing protein At1g74580 
 sly-u.5   101248951   putative pentatricopeptide repeat-containing protein At1g74580 

close


Top 50 coexpressed genes to 7477189 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 7477189 (ppo-u.5 coexpression data)

CoexMap"7477189"


ppoLOC7477189 | Entrez gene ID : 7477189    
Species ppo gma mtr ath vvi sly sbi nta bra osa cre cit hvu bdi sot zma tae bna ghi
Paralog 3 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (4916 genes)  IEA  
Protein XP_024465244.2 [sequence] [blastp]
XP_052312849.1 [sequence] [blastp]
XP_052312850.1 [sequence] [blastp]
XP_052312851.1 [sequence] [blastp]
XP_052312852.1 [sequence] [blastp]
XP_052312853.1 [sequence] [blastp]
XP_052312854.1 [sequence] [blastp]
XP_052312855.1 [sequence] [blastp]
XP_052312856.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  chlo 2,  cyto_nucl 2,  cyto_E.R. 2,  cyto_plas 2  (predict for XP_024465244.2)
cyto 4,  chlo 2,  cyto_nucl 2,  cyto_E.R. 2,  cyto_plas 2  (predict for XP_052312849.1)
cyto 4,  chlo 2,  cyto_nucl 2,  cyto_E.R. 2,  cyto_plas 2  (predict for XP_052312850.1)
cyto 4,  chlo 2,  cyto_nucl 2,  cyto_E.R. 2,  cyto_plas 2  (predict for XP_052312851.1)
cyto 4,  chlo 2,  cyto_nucl 2,  cyto_E.R. 2,  cyto_plas 2  (predict for XP_052312852.1)
cyto 4,  chlo 2,  cyto_nucl 2,  cyto_E.R. 2,  cyto_plas 2  (predict for XP_052312853.1)
cyto 4,  chlo 2,  cyto_nucl 2,  cyto_E.R. 2,  cyto_plas 2  (predict for XP_052312854.1)
cyto 4,  chlo 2,  cyto_nucl 2,  cyto_E.R. 2,  cyto_plas 2  (predict for XP_052312855.1)
cyto 4,  chlo 2,  cyto_nucl 2,  cyto_E.R. 2,  cyto_plas 2  (predict for XP_052312856.1)
Subcellular
localization
TargetP
other 8  (predict for XP_024465244.2)
other 8  (predict for XP_052312849.1)
other 8  (predict for XP_052312850.1)
other 8  (predict for XP_052312851.1)
other 8  (predict for XP_052312852.1)
other 8  (predict for XP_052312853.1)
other 8  (predict for XP_052312854.1)
other 8  (predict for XP_052312855.1)
other 8  (predict for XP_052312856.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7477189

.
ppo-r.4
for
7477189

.
ppo-m.4
for
7477189

.
gma-u.5
for
100811379

.
mtr-u.5
for
25493815

.
ath-u.5
for
AT1G74580

.
vvi-u.5
for
100253631

.
sly-u.5
for
101248951

.


Ortholog ID: 12268
Species ath gma sly bra vvi ppo mtr hvu ghi ghi bna bna sbi sot cit nta nta
Symbol AT1G74580 LOC100811379 LOC101248951 LOC103831928 LOC100253631 LOC7477189 LOC25493815 LOC123426391 LOC107946511 LOC107941781 LOC106404447 LOC106354401 LOC110432196 LOC102585346 LOC102618705 LOC107811606 LOC107807110
Function* Pentatricopeptide repeat (PPR) superfamily protein putative pentatricopeptide repeat-containing protein At1g74580 putative pentatricopeptide repeat-containing protein At1g74580 putative pentatricopeptide repeat-containing protein At1g74580 putative pentatricopeptide repeat-containing protein At1g74580 putative pentatricopeptide repeat-containing protein At1g74580 putative pentatricopeptide repeat-containing protein At1g74580 putative pentatricopeptide repeat-containing protein At1g74580 putative pentatricopeptide repeat-containing protein At1g74580 putative pentatricopeptide repeat-containing protein At1g74580 putative pentatricopeptide repeat-containing protein At1g74580 putative pentatricopeptide repeat-containing protein At1g74580 putative pentatricopeptide repeat-containing protein At1g74580 putative pentatricopeptide repeat-containing protein At1g74580 putative pentatricopeptide repeat-containing protein At1g74580 uncharacterized LOC107811606 uncharacterized LOC107807110
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 2
bra03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 3
bna00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 4
bna00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00430 Taurine and hypotaurine metabolism 2
nta00460 Cyanoamino acid metabolism 2
nta00480 Glutathione metabolism 2
nta00590 Arachidonic acid metabolism 2
nta04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00430 Taurine and hypotaurine metabolism 2
nta00460 Cyanoamino acid metabolism 2
nta00480 Glutathione metabolism 2
nta00590 Arachidonic acid metabolism 2
nta04144 Endocytosis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 843798 100811379 101248951 103831928 100253631 7477189 25493815 123426391 107946511 107941781 106404447 106354401 110432196 102585346 102618705 107811606 107807110
The preparation time of this page was 0.1 [sec].