Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7478099   transcription initiation factor TFIID subunit 9 
 ppo-r.4   7478099   transcription initiation factor TFIID subunit 9 
 gma-u.5   100527659   uncharacterized LOC100527659 
 gma-u.5   100306277   transcription initiation factor TFIID subunit 9-like 
 mtr-u.5   25494130   transcription initiation factor TFIID subunit 9 
 mtr-u.5   11421562   transcription initiation factor TFIID subunit 9 
 ath-u.5   TAFII21   TATA binding protein associated factor 21kDa subunit 
 vvi-u.5   100248023   transcription initiation factor TFIID subunit 9 
 sly-u.5   101244946   transcription initiation factor TFIID subunit 9 
 osa-u.5   4333084   transcription initiation factor TFIID subunit 9 
 zma-u.5   118473402   transcription initiation factor TFIID subunit 9 
 zma-u.5   100191949   transcription initiation factor TFIID subunit 9B 
 zma-u.5   100193677   Transcription initiation factor TFIID subunit 9 

close


Top 50 coexpressed genes to 7478099 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 7478099 (ppo-u.5 coexpression data)

CoexMap"7478099"


ppoLOC7478099 | Entrez gene ID : 7478099    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 2 2 2 1 1 1 1 3 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG pop03022 [list] [network] Basal transcription factors (55 genes)
GO BP
GO:0051123 [list] [network] RNA polymerase II preinitiation complex assembly  (12 genes)  IEA  
GO:0006352 [list] [network] DNA-templated transcription initiation  (71 genes)  IEA  
GO CC
GO:0005669 [list] [network] transcription factor TFIID complex  (22 genes)  IEA  
GO:0000124 [list] [network] SAGA complex  (24 genes)  IEA  
GO MF
GO:0016251 [list] [network] RNA polymerase II general transcription initiation factor activity  (18 genes)  IEA  
GO:0003713 [list] [network] transcription coactivator activity  (49 genes)  IEA  
GO:0046982 [list] [network] protein heterodimerization activity  (111 genes)  IEA  
Protein XP_002299587.3 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  cyto 3,  cysk 1,  cyto_pero 1,  cyto_E.R. 1  (predict for XP_002299587.3)
Subcellular
localization
TargetP
other 9  (predict for XP_002299587.3)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7478099

.
ppo-r.4
for
7478099

.
gma-u.5
for
100527659

.
gma-u.5
for
100306277

.
mtr-u.5
for
25494130

.
mtr-u.5
for
11421562

.
ath-u.5
for
TAFII21

.
vvi-u.5
for
100248023

.
sly-u.5
for
101244946

.
osa-u.5
for
4333084

.
zma-u.5
for
118473402

.
zma-u.5
for
100191949

.
zma-u.5
for
100193677

.


Ortholog ID: 3173
Species ath gma sly osa zma zma bra vvi ppo mtr mtr hvu hvu ghi ghi bna cre sbi sot cit cit bdi bdi nta nta
Symbol TAFII21 LOC100527659 LOC101244946 LOC4333084 LOC100193677 LOC118473402 LOC103832631 LOC100248023 LOC7478099 LOC25494130 LOC11421562 LOC123444736 LOC123444739 LOC107897431 LOC107913866 LOC106434659 CHLRE_07g353350v5 LOC8080424 LOC102577826 LOC102625004 LOC102611696 LOC100828639 LOC100834532 LOC107831428 LOC107810036
Function* TATA binding protein associated factor 21kDa subunit uncharacterized LOC100527659 transcription initiation factor TFIID subunit 9 transcription initiation factor TFIID subunit 9 Transcription initiation factor TFIID subunit 9 transcription initiation factor TFIID subunit 9 transcription initiation factor TFIID subunit 9 transcription initiation factor TFIID subunit 9 transcription initiation factor TFIID subunit 9 transcription initiation factor TFIID subunit 9 transcription initiation factor TFIID subunit 9 transcription initiation factor TFIID subunit 9-like transcription initiation factor TFIID subunit 9-like transcription initiation factor TFIID subunit 9 transcription initiation factor TFIID subunit 9 transcription initiation factor TFIID subunit 9 uncharacterized protein transcription initiation factor TFIID subunit 9 uncharacterized LOC102577826 transcription initiation factor TFIID subunit 9 transcription initiation factor TFIID subunit 9-like transcription initiation factor TFIID subunit 9 transcription initiation factor TFIID subunit 9 transcription initiation factor TFIID subunit 9 transcription initiation factor TFIID subunit 9
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 2
gma03022 Basal transcription factors 2
gma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03050 Proteasome 2
sly03022 Basal transcription factors 2
sly03020 RNA polymerase 2
sly03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 2
osa03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 6
zma03022 Basal transcription factors 2
zma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03022 Basal transcription factors 2
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00020 Citrate cycle (TCA cycle) 3
mtr01200 Carbon metabolism 3
mtr01210 2-Oxocarboxylic acid metabolism 3
mtr03022 Basal transcription factors 3
mtr00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00190 Oxidative phosphorylation 6
mtr00020 Citrate cycle (TCA cycle) 3
mtr01200 Carbon metabolism 3
mtr04141 Protein processing in endoplasmic reticulum 2
mtr03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03022 Basal transcription factors 3
hvu04120 Ubiquitin mediated proteolysis 2
hvu04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03022 Basal transcription factors 2
ghi04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03022 Basal transcription factors 2
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03022 Basal transcription factors 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03050 Proteasome 4
sbi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 2
sot03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03022 Basal transcription factors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04120 Ubiquitin mediated proteolysis 2
cit03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03022 Basal transcription factors 3
bdi04136 Autophagy - other 2
bdi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03022 Basal transcription factors 3
bdi04136 Autophagy - other 2
bdi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03020 RNA polymerase 5
nta03420 Nucleotide excision repair 5
nta04120 Ubiquitin mediated proteolysis 4
nta03022 Basal transcription factors 2
nta03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04120 Ubiquitin mediated proteolysis 5
nta03020 RNA polymerase 5
nta03420 Nucleotide excision repair 5
nta03083 Polycomb repressive complex 3
nta04141 Protein processing in endoplasmic reticulum 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 841854 100527659 101244946 4333084 100193677 118473402 103832631 100248023 7478099 25494130 11421562 123444736 123444739 107897431 107913866 106434659 5727628 8080424 102577826 102625004 102611696 100828639 100834532 107831428 107810036
The preparation time of this page was 0.1 [sec].