Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7478117   probable polygalacturonase At1g80170 
 ppo-r.4   7478117   probable polygalacturonase At1g80170 
 ppo-m.4   7478117   probable polygalacturonase At1g80170 
 ppo-u.5   7468975   polygalacturonase 
 gma-u.5   100819195   probable polygalacturonase At1g80170 
 mtr-u.5   11444474   polygalacturonase 
 ath-u.5   PGAZAT   polygalacturonase ADPG2-like protein 
 ath-u.5   QRT2   Pectin lyase-like superfamily protein 
 vvi-u.5   100255477   polygalacturonase 
 vvi-u.5   100855221   polygalacturonase 
 vvi-u.5   100257239   polygalacturonase 
 sly-u.5   101264436   probable polygalacturonase At1g80170 
 sly-u.5   PG2   polygalacturonase-2a 
 osa-u.5   4342698   polygalacturonase 
 zma-u.5   103644218   polygalacturonase ADPG1 
 zma-u.5   103644217   polygalacturonase 

close


Top 50 coexpressed genes to 7478117 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 7478117 (ppo-u.5 coexpression data)

CoexMap"7478117"


ppoLOC7478117 | Entrez gene ID : 7478117    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 4 1 1 2 3 2 1 2 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0005975 [list] [network] carbohydrate metabolic process  (863 genes)  IEA  
GO CC
GO MF
GO:0004650 [list] [network] polygalacturonase activity  (77 genes)  IEA  
Protein XP_024457434.2 [sequence] [blastp]
XP_024457441.2 [sequence] [blastp]
XP_024457444.2 [sequence] [blastp]
XP_024457447.2 [sequence] [blastp]
XP_024457452.2 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  chlo 3,  cyto_nucl 2,  mito 1,  plas 1,  extr 1,  vacu 1,  mito_plas 1  (predict for XP_024457434.2)
cyto 4,  chlo 3,  cyto_nucl 2,  mito 1,  plas 1,  extr 1,  vacu 1,  mito_plas 1  (predict for XP_024457441.2)
cyto 4,  chlo 3,  cyto_nucl 2,  mito 1,  plas 1,  extr 1,  vacu 1,  mito_plas 1  (predict for XP_024457444.2)
chlo 4,  cyto 4,  mito 1,  plas 1,  extr 1,  vacu 1,  mito_plas 1  (predict for XP_024457447.2)
cysk 6,  cyto 1,  chlo 1,  nucl 1,  extr 1,  cyto_pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for XP_024457452.2)
Subcellular
localization
TargetP
mito 4  (predict for XP_024457434.2)
mito 4  (predict for XP_024457441.2)
mito 4  (predict for XP_024457444.2)
mito 4  (predict for XP_024457447.2)
other 8  (predict for XP_024457452.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7478117

.
ppo-r.4
for
7478117

.
ppo-m.4
for
7478117

.
ppo-u.5
for
7468975

.
gma-u.5
for
100819195

.
mtr-u.5
for
11444474

.
ath-u.5
for
PGAZAT

.
ath-u.5
for
QRT2

.
vvi-u.5
for
100255477

.
vvi-u.5
for
100855221

.
vvi-u.5
for
100257239

.
sly-u.5
for
101264436

.
sly-u.5
for
PG2

.
osa-u.5
for
4342698

.
zma-u.5
for
103644218

.
zma-u.5
for
103644217

.


Ortholog ID: 458
Species ath sly sly osa zma zma vvi ppo mtr ghi sot sot cit bdi nta nta
Symbol QRT2 PG2 LOC101264436 LOC4339483 LOC103644217 LOC103644218 LOC100243033 LOC7478117 LOC11433078 LOC107950651 LOC102594305 LOC102585179 PG LOC100829282 LOC107824130 LOC107779855
Function* Pectin lyase-like superfamily protein polygalacturonase-2a probable polygalacturonase At1g80170 probable polygalacturonase At1g80170 polygalacturonase polygalacturonase ADPG1 polygalacturonase probable polygalacturonase At1g80170 probable polygalacturonase At1g80170 polygalacturonase QRT2 probable polygalacturonase At1g80170 probable polygalacturonase At1g80170 polygalacturonase uncharacterized LOC100829282 polygalacturonase-2-like probable polygalacturonase At1g80170
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath02010 ABC transporters 4
ath04981 Folate transport and metabolism 4
ath00561 Glycerolipid metabolism 2
ath00564 Glycerophospholipid metabolism 2
ath00073 Cutin, suberine and wax biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00360 Phenylalanine metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00941 Flavonoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00073 Cutin, suberine and wax biosynthesis 4
ghi00561 Glycerolipid metabolism 2
ghi00564 Glycerophospholipid metabolism 2
ghi00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00904 Diterpenoid biosynthesis 3
sot00380 Tryptophan metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00040 Pentose and glucuronate interconversions 3
nta00562 Inositol phosphate metabolism 2
nta00564 Glycerophospholipid metabolism 2
nta00565 Ether lipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00531 Glycosaminoglycan degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 819988 544051 101264436 4339483 103644217 103644218 100243033 7478117 11433078 107950651 102594305 102585179 102578026 100829282 107824130 107779855
The preparation time of this page was 0.1 [sec].