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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7478156   copper-transporting ATPase PAA1, chloroplastic 
 ppo-r.4   7478156   copper-transporting ATPase PAA1, chloroplastic 
 ppo-u.5   7470538   copper-transporting ATPase PAA1, chloroplastic 
 ppo-u.5   18107733   copper-transporting ATPase PAA2, chloroplastic 
 gma-u.5   100777857   copper-transporting ATPase PAA1, chloroplastic 
 gma-u.5   100796210   copper-transporting ATPase PAA1, chloroplastic 
 gma-u.5   HMA8   chloroplast copper-translocating HMA8 P-ATPase 
 mtr-u.5   11428787   copper-transporting ATPase PAA2, chloroplastic 
 mtr-u.5   25493272   copper-transporting ATPase PAA1, chloroplastic 
 ath-u.5   PAA1   P-type ATP-ase 1 
 ath-u.5   PAA2   uncharacterized protein 
 vvi-u.5   100257685   copper-transporting ATPase PAA1, chloroplastic 
 vvi-u.5   100264462   copper-transporting ATPase PAA2, chloroplastic 
 sly-u.5   101267332   copper-transporting ATPase PAA2, chloroplastic 
 sly-u.5   101265776   copper-transporting ATPase PAA1, chloroplastic 
 osa-u.5   4345883   copper-transporting ATPase PAA1, chloroplastic 
 osa-u.5   4331814   copper-transporting ATPase PAA2, chloroplastic 
 zma-u.5   100383364   uncharacterized LOC100383364 
 zma-u.5   100381708   uncharacterized LOC100381708 

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Top 50 coexpressed genes to 7478156 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7478156 (ppo-u.5 coexpression data)

CoexMap"7478156"


ppoLOC7478156 | Entrez gene ID : 7478156    
Species ppo gma mtr ath vvi sly osa zma cre ghi cit hvu bdi sot bra sbi tae nta bna
Paralog 4 3 2 2 2 2 2 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG pop04016 [list] [network] MAPK signaling pathway - plant (198 genes)
GO BP
GO:0055070 [list] [network] copper ion homeostasis  (13 genes)  IEA  
GO:0006812 [list] [network] monoatomic cation transport  (326 genes)  IEA  
GO CC
GO:0016020 [list] [network] membrane  (3780 genes)  IEA  
GO MF
GO:0043682 [list] [network] P-type divalent copper transporter activity  (4 genes)  IEA  
GO:0005507 [list] [network] copper ion binding  (101 genes)  IEA  
GO:0016887 [list] [network] ATP hydrolysis activity  (550 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (2559 genes)  IEA  
Protein XP_024452595.2 [sequence] [blastp]
XP_024452596.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  mito 1,  cyto_mito 1  (predict for XP_024452595.2)
chlo 8,  mito 1,  cyto_mito 1  (predict for XP_024452596.2)
Subcellular
localization
TargetP
chlo 9  (predict for XP_024452595.2)
chlo 9  (predict for XP_024452596.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7478156

.
ppo-r.4
for
7478156

.
ppo-u.5
for
7470538

.
ppo-u.5
for
18107733

.
gma-u.5
for
100777857

.
gma-u.5
for
100796210

.
gma-u.5
for
HMA8

.
mtr-u.5
for
11428787

.
mtr-u.5
for
25493272

.
ath-u.5
for
PAA1

.
ath-u.5
for
PAA2

.
vvi-u.5
for
100257685

.
vvi-u.5
for
100264462

.
sly-u.5
for
101267332

.
sly-u.5
for
101265776

.
osa-u.5
for
4345883

.
osa-u.5
for
4331814

.
zma-u.5
for
100383364

.
zma-u.5
for
100381708

.


Ortholog ID: 3034
Species ath ath gma gma sly sly osa osa zma zma bra bra vvi vvi ppo ppo mtr mtr tae tae hvu hvu ghi ghi bna bna cre cre sbi sbi sot sot cit cit bdi bdi nta nta
Symbol PAA1 PAA2 LOC100796210 LOC100777857 LOC101265776 LOC101267332 LOC4345883 LOC4331814 LOC100381708 LOC100383364 LOC103846231 LOC103845593 LOC100264462 LOC100257685 LOC18107733 LOC7478156 LOC25493272 LOC11428787 LOC123098640 LOC123164433 LOC123449600 LOC123406919 LOC107900981 LOC107887448 LOC106421334 LOC106371676 CHLRE_10g424775v5 CHLRE_10g422201v5 LOC8059792 LOC8067039 LOC102597236 LOC102600832 LOC102619303 LOC102612705 LOC100831918 LOC100823284 LOC107811884 LOC107763623
Function* P-type ATP-ase 1 uncharacterized protein copper-transporting ATPase PAA1, chloroplastic copper-transporting ATPase PAA1, chloroplastic copper-transporting ATPase PAA1, chloroplastic copper-transporting ATPase PAA2, chloroplastic copper-transporting ATPase PAA1, chloroplastic copper-transporting ATPase PAA2, chloroplastic uncharacterized LOC100381708 uncharacterized LOC100383364 copper-transporting ATPase PAA1, chloroplastic copper-transporting ATPase PAA2, chloroplastic copper-transporting ATPase PAA2, chloroplastic copper-transporting ATPase PAA1, chloroplastic copper-transporting ATPase PAA2, chloroplastic copper-transporting ATPase PAA1, chloroplastic copper-transporting ATPase PAA1, chloroplastic copper-transporting ATPase PAA2, chloroplastic copper-transporting ATPase PAA2, chloroplastic copper-transporting ATPase PAA1, chloroplastic copper-transporting ATPase PAA2, chloroplastic copper-transporting ATPase PAA1, chloroplastic copper-transporting ATPase PAA2, chloroplastic copper-transporting ATPase PAA1, chloroplastic copper-transporting ATPase PAA2, chloroplastic copper-transporting ATPase PAA2, chloroplastic uncharacterized protein uncharacterized protein copper-transporting ATPase PAA2, chloroplastic copper-transporting ATPase PAA1, chloroplastic copper-transporting ATPase PAA2, chloroplastic-like copper-transporting ATPase PAA2, chloroplastic-like copper-transporting ATPase PAA2, chloroplastic copper-transporting ATPase PAA1, chloroplastic copper-transporting ATPase PAA2, chloroplastic copper-transporting ATPase PAA1, chloroplastic copper-transporting ATPase PAA1, chloroplastic copper-transporting ATPase PAA1, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 3
ath00480 Glutathione metabolism 2
ath04016 MAPK signaling pathway - plant 2
ath00240 Pyrimidine metabolism 2
ath01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00280 Valine, leucine and isoleucine degradation 3
ath03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03018 RNA degradation 3
gma00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 5
gma00591 Linoleic acid metabolism 2
gma00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00020 Citrate cycle (TCA cycle) 2
sly00620 Pyruvate metabolism 2
sly00630 Glyoxylate and dicarboxylate metabolism 2
sly01200 Carbon metabolism 2
sly01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00970 Aminoacyl-tRNA biosynthesis 4
osa03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00970 Aminoacyl-tRNA biosynthesis 4
zma00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00260 Glycine, serine and threonine metabolism 3
bra00630 Glyoxylate and dicarboxylate metabolism 3
bra01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 4
vvi04146 Peroxisome 2
vvi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03013 Nucleocytoplasmic transport 3
vvi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00970 Aminoacyl-tRNA biosynthesis 3
mtr03060 Protein export 2
mtr04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00010 Glycolysis / Gluconeogenesis 3
tae04016 MAPK signaling pathway - plant 3
tae00450 Selenocompound metabolism 3
tae00030 Pentose phosphate pathway 3
tae00040 Pentose and glucuronate interconversions 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04016 MAPK signaling pathway - plant 3
tae03082 ATP-dependent chromatin remodeling 3
tae03040 Spliceosome 3
tae03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00562 Inositol phosphate metabolism 2
ghi04070 Phosphatidylinositol signaling system 2
ghi04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01230 Biosynthesis of amino acids 4
ghi00561 Glycerolipid metabolism 2
ghi03060 Protein export 2
ghi00260 Glycine, serine and threonine metabolism 2
ghi00261 Monobactam biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00500 Starch and sucrose metabolism 2
bna03060 Protein export 2
bna04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00500 Starch and sucrose metabolism 2
bna03060 Protein export 2
bna04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00620 Pyruvate metabolism 3
sbi00710 Carbon fixation by Calvin cycle 3
sbi01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01240 Biosynthesis of cofactors 5
sot00920 Sulfur metabolism 5
sot01320 Sulfur cycle 4
sot04016 MAPK signaling pathway - plant 2
sot00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04016 MAPK signaling pathway - plant 2
sot01240 Biosynthesis of cofactors 2
sot01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01200 Carbon metabolism 3
cit00280 Valine, leucine and isoleucine degradation 2
cit00630 Glyoxylate and dicarboxylate metabolism 2
cit04016 MAPK signaling pathway - plant 2
cit03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00630 Glyoxylate and dicarboxylate metabolism 5
bdi01200 Carbon metabolism 4
bdi00710 Carbon fixation by Calvin cycle 3
bdi00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00970 Aminoacyl-tRNA biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00330 Arginine and proline metabolism 3
nta04016 MAPK signaling pathway - plant 2
nta00220 Arginine biosynthesis 2
nta01210 2-Oxocarboxylic acid metabolism 2
nta01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00330 Arginine and proline metabolism 3
nta04016 MAPK signaling pathway - plant 2
nta00220 Arginine biosynthesis 2
nta01210 2-Oxocarboxylic acid metabolism 2
nta01230 Biosynthesis of amino acids 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 829490 832253 100796210 100777857 101265776 101267332 4345883 4331814 100381708 100383364 103846231 103845593 100264462 100257685 18107733 7478156 25493272 11428787 123098640 123164433 123449600 123406919 107900981 107887448 106421334 106371676 5728203 5728250 8059792 8067039 102597236 102600832 102619303 102612705 100831918 100823284 107811884 107763623
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