ATTED-II : GeneCoexpression result

Species	Gene	Description
ppo-u.5	7478392	uncharacterized LOC7478392
ppo-r.4	7478392	uncharacterized LOC7478392
ppo-u.5	7472981	uncharacterized LOC7472981
ppo-u.5	18100408	uncharacterized LOC18100408
gma-u.5	100792375	uncharacterized LOC100792375
gma-u.5	121175104	uncharacterized LOC121175104
gma-u.5	100793858	uncharacterized LOC100793858
mtr-u.5	25496896	uncharacterized LOC25496896
ath-u.5	AT4G13270	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
ath-u.5	AT1G52330	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
vvi-u.5	100258307	uncharacterized LOC100258307
vvi-u.5	100254347	uncharacterized LOC100254347
sly-u.5	101250488	uncharacterized LOC101250488
osa-u.5	4333805	uncharacterized LOC4333805
zma-u.5	100216707	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
zma-u.5	100273513	uncharacterized LOC100273513

Annotation

functional annotation

KEGG

GO BP

GO CC

GO:0005886 [list] [network] plasma membrane

(1125 genes)

IEA

GO MF

Protein

XP_002304190.3 [sequence] [blastp]
XP_024452932.1 [sequence] [blastp]
XP_024452933.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 4, chlo 1, E.R. 1, mito 1, plas 1, extr 1, vacu 1, mito_plas 1	(predict for XP_002304190.3)
cyto 5, chlo 2, nucl 1, mito 1, plas 1, E.R. 1, nucl_plas 1, E.R._plas 1, mito_plas 1	(predict for XP_024452932.1)
cyto 4, chlo 1, E.R. 1, mito 1, plas 1, extr 1, cysk 1, E.R._vacu 1, cysk_plas 1, mito_plas 1	(predict for XP_024452933.1)

Subcellular
localization
TargetP

other 5, chlo 5	(predict for XP_002304190.3)
other 5, chlo 5	(predict for XP_024452932.1)
other 5, chlo 5	(predict for XP_024452933.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ppo-u.5 for 7478392	ppo-r.4 for 7478392	ppo-u.5 for 7472981	ppo-u.5 for 18100408	gma-u.5 for 100792375	gma-u.5 for 121175104	gma-u.5 for 100793858	mtr-u.5 for 25496896	ath-u.5 for AT4G13270	ath-u.5 for AT1G52330	vvi-u.5 for 100258307	vvi-u.5 for 100254347	sly-u.5 for 101250488	osa-u.5 for 4333805	zma-u.5 for 100216707	zma-u.5 for 100273513

Ortholog

Ortholog ID: 4942

Species

ppo

gma

mtr

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

uncharacterized LOC7472981

uncharacterized LOC7478392

uncharacterized LOC100793858

uncharacterized LOC100792375

uncharacterized LOC25496896

Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family

uncharacterized LOC103833354

uncharacterized LOC100258307

uncharacterized LOC100254347

uncharacterized LOC107932940

uncharacterized LOC106423585

uncharacterized BNAC06G09630D

hypothetical protein

uncharacterized LOC101250488

uncharacterized LOC102589613

uncharacterized LOC107778072

uncharacterized LOC107805891

uncharacterized LOC4333805

uncharacterized LOC100273513

Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family

uncharacterized LOC123090767

uncharacterized LOC123087188

uncharacterized LOC123447269

uncharacterized LOC8062954

uncharacterized LOC100825061

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04120	Ubiquitin mediated proteolysis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04142	Lysosome	2
vvi00941	Flavonoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04144	Endocytosis	2
vvi04136	Autophagy - other	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04016	MAPK signaling pathway - plant	2
bna04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit01230	Biosynthesis of amino acids	3
cit01210	2-Oxocarboxylic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00563	Glycosylphosphatidylinositol (GPI)-anchor biosynthesis	3
sot00900	Terpenoid backbone biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00010	Glycolysis / Gluconeogenesis	2
nta00030	Pentose phosphate pathway	2
nta00051	Fructose and mannose metabolism	2
nta00052	Galactose metabolism	2
nta01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00010	Glycolysis / Gluconeogenesis	2
nta00030	Pentose phosphate pathway	2
nta00051	Fructose and mannose metabolism	2
nta00052	Galactose metabolism	2
nta01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03410	Base excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03410	Base excision repair	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00071	Fatty acid degradation	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00071	Fatty acid degradation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04144	Endocytosis	2

Expression

Expression pattern

Entrez Gene ID^*

7472981

7478392

100793858

100792375

25496896

826957

841664

103833354

100258307

100254347

107932940

106423585

106425177

102611769

102615257

101250488

102589613

107778072

107805891

4333805

100273513

100216707

123090767

123087188

123447269

8062954

100825061

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 7478392 (ppo-u.5 coexpression data)

Top 50 enrichment test to 7478392 (ppo-u.5 coexpression data)


Species	ppo	gma	mtr	ath	vvi	sly	osa	zma	bdi	hvu	bra	cit	bna	sbi	ghi	sot	nta	cre	tae
Paralog	4	3	1	2	2	1	1	2	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 7478392 (ppo-u.5 coexpression data)

Top 50 enrichment test to 7478392 (ppo-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**