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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7478730   uncharacterized LOC7478730 
 ppo-r.4   7478730   uncharacterized LOC7478730 
 ppo-m.4   7478730   uncharacterized LOC7478730 
 gma-u.5   100305878   uncharacterized LOC100305878 
 mtr-u.5   11439090   histone deacetylase 6 
 ath-u.5   AT2G14825   histone deacetylase-like protein 
 vvi-u.5   100246442   uncharacterized LOC100246442 
 sly-u.5   101256924   uncharacterized LOC101256924 
 osa-u.5   9268136   uncharacterized LOC9268136 
 zma-u.5   100273587   histone deacetylase 6 

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Top 50 coexpressed genes to 7478730 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7478730 (ppo-u.5 coexpression data)

CoexMap"7478730"


ppoLOC7478730 | Entrez gene ID : 7478730    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 3 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (777 genes)  IEA  
Protein XP_002313903.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  mito 1,  extr 1,  chlo 1,  cyto 1,  cyto_mito 1,  mito_plas 1  (predict for XP_002313903.1)
Subcellular
localization
TargetP
other 8  (predict for XP_002313903.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7478730

.
ppo-r.4
for
7478730

.
ppo-m.4
for
7478730

.
gma-u.5
for
100305878

.
mtr-u.5
for
11439090

.
ath-u.5
for
AT2G14825

.
vvi-u.5
for
100246442

.
sly-u.5
for
101256924

.
osa-u.5
for
9268136

.
zma-u.5
for
100273587

.


Ortholog ID: 11234
Species ath gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol AT2G14825 LOC100305878 LOC101256924 LOC9268136 LOC100273587 LOC103847971 LOC100246442 LOC7478730 LOC11439090 LOC123102739 LOC123119897 LOC123451755 LOC107886958 LOC107908853 LOC106409083 LOC106432953 LOC8067194 LOC102588265 LOC102611806 LOC100822662 LOC107803505 LOC107771251
Function* histone deacetylase-like protein uncharacterized LOC100305878 uncharacterized LOC101256924 uncharacterized LOC9268136 histone deacetylase 6 histone deacetylase 6 uncharacterized LOC100246442 uncharacterized LOC7478730 histone deacetylase 6 histone deacetylase 6 histone deacetylase 6 histone deacetylase 6 NAD-dependent deacetylase sir2A NAD-dependent deacetylase sir2A histone deacetylase 6 histone deacetylase 6 histone deacetylase 6 histone deacetylase 6 uncharacterized LOC102611806 histone deacetylase 6 uncharacterized LOC107803505 uncharacterized LOC107771251
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04144 Endocytosis 2
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04120 Ubiquitin mediated proteolysis 4
sly03083 Polycomb repressive complex 2
sly04141 Protein processing in endoplasmic reticulum 2
sly03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03050 Proteasome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03013 Nucleocytoplasmic transport 3
ppo03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 6
ghi00940 Phenylpropanoid biosynthesis 2
ghi00941 Flavonoid biosynthesis 2
ghi00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04145 Phagosome 4
bna04148 Efferocytosis 4
bna04517 IgSF CAM signaling 4
bna04518 Integrin signaling 4
bna04620 Toll-like receptor signaling pathway 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00564 Glycerophospholipid metabolism 2
sbi00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03050 Proteasome 7
sot03040 Spliceosome 3
sot03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 2
cit03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 2
nta03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 2
nta00071 Fatty acid degradation 2
nta00280 Valine, leucine and isoleucine degradation 2
nta00310 Lysine degradation 2
nta00360 Phenylalanine metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 815971 100305878 101256924 9268136 100273587 103847971 100246442 7478730 11439090 123102739 123119897 123451755 107886958 107908853 106409083 106432953 8067194 102588265 102611806 100822662 107803505 107771251
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