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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7458811   RING-H2 finger protein ATL73 
 ppo-u.5   7472472   RING-H2 finger protein ATL74 
 ppo-u.5   7455234   RING-H2 finger protein ATL74 
 gma-u.5   100787273   RING-H2 finger protein ATL74 
 gma-u.5   100810195   RING-H2 finger protein ATL74 
 gma-u.5   100814602   RING-H2 finger protein ATL74 
 mtr-u.5   11432082   RING-H2 finger protein ATL74 
 mtr-u.5   25489830   RING-H2 finger protein ATL74-like 
 ath-u.5   AT3G10910   RING/U-box superfamily protein 
 ath-u.5   AT5G01880   RING/U-box superfamily protein 
 vvi-u.5   100243283   RING-H2 finger protein ATL74 
 vvi-u.5   100248379   RING-H2 finger protein ATL74 
 sly-u.5   101255204   RING-H2 finger protein ATL74 
 osa-u.5   107278369   RING-H2 finger protein ATL74 
 osa-u.5   4327616   RING-H2 finger protein ATL74 
 osa-u.5   4349606   RING-H2 finger protein ATL74-like 
 zma-u.5   103640726   RING-H2 finger protein ATL74 

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Top 50 coexpressed genes to 7458811 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7458811 (ppo-u.5 coexpression data)

CoexMap"7479035"


ppoLOC7479035 | Entrez gene ID : 7479035    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 3 3 2 2 2 1 3 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0016567 [list] [network] protein ubiquitination  (417 genes)  IEA  
GO CC
GO MF
GO:0016740 [list] [network] transferase activity  (4072 genes)  IEA  
Protein XP_024438720.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  extr 1  (predict for XP_024438720.2)
Subcellular
localization
TargetP
mito 5,  other 4  (predict for XP_024438720.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7458811

.
ppo-u.5
for
7472472

.
ppo-u.5
for
7455234

.
gma-u.5
for
100787273

.
gma-u.5
for
100810195

.
gma-u.5
for
100814602

.
mtr-u.5
for
11432082

.
mtr-u.5
for
25489830

.
ath-u.5
for
AT3G10910

.
ath-u.5
for
AT5G01880

.
vvi-u.5
for
100243283

.
vvi-u.5
for
100248379

.
sly-u.5
for
101255204

.
osa-u.5
for
107278369

.
osa-u.5
for
4327616

.
osa-u.5
for
4349606

.
zma-u.5
for
103640726

.


Ortholog ID: 2721
Species ath ath gma gma sly osa osa zma bra bra vvi vvi ppo ppo mtr tae tae hvu hvu ghi ghi bna bna sbi sot cit cit bdi nta nta
Symbol AT3G10910 AT5G01880 LOC100814602 LOC100808245 LOC101255204 LOC107278369 LOC4349606 LOC103640726 LOC103847239 LOC103850400 LOC100248379 LOC100243283 LOC7455234 LOC7464732 LOC11432082 LOC123091532 LOC123086462 LOC123440428 LOC123446226 LOC107962372 LOC107914534 LOC106431784 LOC125581368 LOC8067180 LOC102581573 LOC102625542 LOC102613784 LOC104584644 LOC107783810 LOC107794582
Function* RING/U-box superfamily protein RING/U-box superfamily protein RING-H2 finger protein ATL74 RING-H2 finger protein ATL74 RING-H2 finger protein ATL74 RING-H2 finger protein ATL74 RING-H2 finger protein ATL74-like RING-H2 finger protein ATL74 RING-H2 finger protein ATL72 RING-H2 finger protein ATL74 RING-H2 finger protein ATL74 RING-H2 finger protein ATL74 RING-H2 finger protein ATL74 RING-H2 finger protein ATL74 RING-H2 finger protein ATL74 RING-H2 finger protein ATL74 RING-H2 finger protein ATL74 RING-H2 finger protein ATL74-like RING-H2 finger protein ATL74-like RING-H2 finger protein ATL73 RING-H2 finger protein ATL74 RING-H2 finger protein ATL74 RING-H2 finger protein ATL74 RING-H2 finger protein ATL74 RING-H2 finger protein ATL74-like RING-H2 finger protein ATL74 RING-H2 finger protein ATL74 RING-H2 finger protein ATL74 RING-H2 finger protein ATL74 RING-H2 finger protein ATL74-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00940 Phenylpropanoid biosynthesis 4
ath00941 Flavonoid biosynthesis 3
ath00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 3
ath00071 Fatty acid degradation 2
ath01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04712 Circadian rhythm - plant 4
gma00330 Arginine and proline metabolism 2
gma00410 beta-Alanine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03083 Polycomb repressive complex 2
gma04120 Ubiquitin mediated proteolysis 2
gma04141 Protein processing in endoplasmic reticulum 2
gma04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00062 Fatty acid elongation 3
sly04626 Plant-pathogen interaction 3
sly04016 MAPK signaling pathway - plant 2
sly04075 Plant hormone signal transduction 2
sly04081 Hormone signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00710 Carbon fixation by Calvin cycle 4
zma01200 Carbon metabolism 4
zma01230 Biosynthesis of amino acids 3
zma00195 Photosynthesis 2
zma00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00940 Phenylpropanoid biosynthesis 7
bra00941 Flavonoid biosynthesis 4
bra00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 4
bra00360 Phenylalanine metabolism 2
bra01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00030 Pentose phosphate pathway 2
sbi00480 Glutathione metabolism 2
sbi01200 Carbon metabolism 2
sbi00910 Nitrogen metabolism 2
sbi00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 6
sot04016 MAPK signaling pathway - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00010 Glycolysis / Gluconeogenesis 2
nta00053 Ascorbate and aldarate metabolism 2
nta00071 Fatty acid degradation 2
nta00260 Glycine, serine and threonine metabolism 2
nta00280 Valine, leucine and isoleucine degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 820261 831691 100814602 100808245 101255204 107278369 4349606 103640726 103847239 103850400 100248379 100243283 7455234 7464732 11432082 123091532 123086462 123440428 123446226 107962372 107914534 106431784 125581368 8067180 102581573 102625542 102613784 104584644 107783810 107794582
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