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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7479699   lysine-specific histone demethylase 1 homolog 3 
 ppo-r.4   7479699   lysine-specific histone demethylase 1 homolog 3 
 ppo-u.5   7493945   lysine-specific histone demethylase 1 homolog 3 
 gma-u.5   100791869   lysine-specific histone demethylase 1 homolog 3 
 gma-u.5   100779479   lysine-specific histone demethylase 1 homolog 3 
 mtr-u.5   11426826   lysine-specific histone demethylase 1 homolog 3 
 mtr-u.5   11416384   lysine-specific histone demethylase 1 homolog 3 
 ath-u.5   LDL3   LSD1-like 3 
 vvi-u.5   100255769   lysine-specific histone demethylase 1 homolog 3 
 sly-u.5   101247522   lysine-specific histone demethylase 1 homolog 3 
 osa-u.5   4349214   lysine-specific histone demethylase 1 homolog 3 
 zma-u.5   103637393   lysine-specific histone demethylase 1 homolog 3 

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Top 50 coexpressed genes to 7479699 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7479699 (ppo-u.5 coexpression data)

CoexMap"7479699"


ppoLOC7479699 | Entrez gene ID : 7479699    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 3 2 2 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0016491 [list] [network] oxidoreductase activity  (1602 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4916 genes)  IEA  
Protein XP_002300727.2 [sequence] [blastp]
XP_052306678.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9,  cyto 1,  E.R. 1,  cyto_E.R. 1  (predict for XP_002300727.2)
nucl 9,  cyto 1,  E.R. 1,  cyto_E.R. 1  (predict for XP_052306678.1)
Subcellular
localization
TargetP
other 8  (predict for XP_002300727.2)
other 8  (predict for XP_052306678.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7479699

.
ppo-r.4
for
7479699

.
ppo-u.5
for
7493945

.
gma-u.5
for
100791869

.
gma-u.5
for
100779479

.
mtr-u.5
for
11426826

.
mtr-u.5
for
11416384

.
ath-u.5
for
LDL3

.
vvi-u.5
for
100255769

.
sly-u.5
for
101247522

.
osa-u.5
for
4349214

.
zma-u.5
for
103637393

.


Ortholog ID: 9017
Species ath gma gma sly osa zma bra vvi ppo ppo mtr mtr tae tae hvu ghi ghi bna bna sbi sot cit bdi nta
Symbol LDL3 LOC100791869 LOC100779479 LOC101247522 LOC4349214 LOC103637393 LOC103849514 LOC100255769 LOC7493945 LOC7479699 LOC11426826 LOC11416384 LOC123129088 LOC123146258 LOC123402801 LOC107910719 LOC107934347 LOC106360660 LOC106415213 LOC8062879 LOC102586217 LOC102614145 LOC100845102 LOC107795945
Function* LSD1-like 3 lysine-specific histone demethylase 1 homolog 3 lysine-specific histone demethylase 1 homolog 3 lysine-specific histone demethylase 1 homolog 3 lysine-specific histone demethylase 1 homolog 3 lysine-specific histone demethylase 1 homolog 3 lysine-specific histone demethylase 1 homolog 3 lysine-specific histone demethylase 1 homolog 3 lysine-specific histone demethylase 1 homolog 3 lysine-specific histone demethylase 1 homolog 3 lysine-specific histone demethylase 1 homolog 3 lysine-specific histone demethylase 1 homolog 3 lysine-specific histone demethylase 1 homolog 3 lysine-specific histone demethylase 1 homolog 3 lysine-specific histone demethylase 1 homolog 3 lysine-specific histone demethylase 1 homolog 3 lysine-specific histone demethylase 1 homolog 3 lysine-specific histone demethylase 1 homolog 3 lysine-specific histone demethylase 1 homolog 3 lysine-specific histone demethylase 1 homolog 3 lysine-specific histone demethylase 1 homolog 3 lysine-specific histone demethylase 1 homolog 3 lysine-specific histone demethylase 1 homolog 3 lysine-specific histone demethylase 1 homolog 3
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03083 Polycomb repressive complex 2
ath03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03018 RNA degradation 2
gma03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03013 Nucleocytoplasmic transport 2
gma03040 Spliceosome 2
gma03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 5
mtr03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 2
mtr04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00562 Inositol phosphate metabolism 2
ghi04070 Phosphatidylinositol signaling system 2
ghi04145 Phagosome 2
ghi00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00562 Inositol phosphate metabolism 3
ghi04070 Phosphatidylinositol signaling system 3
ghi04145 Phagosome 3
ghi00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04120 Ubiquitin mediated proteolysis 2
bdi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00310 Lysine degradation 2
nta00562 Inositol phosphate metabolism 2
nta04070 Phosphatidylinositol signaling system 2
nta04145 Phagosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 827325 100791869 100779479 101247522 4349214 103637393 103849514 100255769 7493945 7479699 11426826 11416384 123129088 123146258 123402801 107910719 107934347 106360660 106415213 8062879 102586217 102614145 100845102 107795945
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