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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7480273   protein TIFY 4B 
 ppo-r.4   7480273   protein TIFY 4B 
 ppo-m.4   7480273   protein TIFY 4B 
 ppo-u.5   7480677   protein TIFY 4B 
 gma-u.5   100808970   protein TIFY 4B 
 gma-u.5   100813937   protein TIFY 4B 
 mtr-u.5   25485144   protein TIFY 4B 
 ath-u.5   PPD1   TIFY domain/Divergent CCT motif family protein 
 ath-u.5   AT4G14720   TIFY domain/Divergent CCT motif family protein 
 vvi-u.5   100246035   protein TIFY 4B 
 vvi-u.5   100242586   protein TIFY 4B 
 sly-u.5   101265858   protein TIFY 4B 
 sly-u.5   101259854   protein TIFY 4B 

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Top 50 coexpressed genes to 7480273 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7480273 (ppo-u.5 coexpression data)

CoexMap"7480273"


ppoLOC7480273 | Entrez gene ID : 7480273    
Species ppo gma mtr ath vvi sly tae osa hvu zma ghi bdi cit bra cre sbi bna nta sot
Paralog 4 2 1 2 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009611 [list] [network] response to wounding  (21 genes)  IEA  
GO:2000022 [list] [network] regulation of jasmonic acid mediated signaling pathway  (24 genes)  IEA  
GO:0031347 [list] [network] regulation of defense response  (31 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (3662 genes)  IEA  
GO MF
Protein XP_006383674.1 [sequence] [blastp]
XP_024456303.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for XP_006383674.1)
nucl 10  (predict for XP_024456303.1)
Subcellular
localization
TargetP
other 9  (predict for XP_006383674.1)
other 9  (predict for XP_024456303.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7480273

.
ppo-r.4
for
7480273

.
ppo-m.4
for
7480273

.
ppo-u.5
for
7480677

.
gma-u.5
for
100808970

.
gma-u.5
for
100813937

.
mtr-u.5
for
25485144

.
ath-u.5
for
PPD1

.
ath-u.5
for
AT4G14720

.
vvi-u.5
for
100246035

.
vvi-u.5
for
100242586

.
sly-u.5
for
101265858

.
sly-u.5
for
101259854

.


Ortholog ID: 7273
Species ath ath gma gma sly sly bra bra vvi vvi ppo ppo mtr ghi ghi bna bna sot sot cit cit nta nta
Symbol PPD1 AT4G14720 LOC100808970 LOC100813937 LOC101259854 LOC101265858 LOC103871821 LOC103833464 LOC100246035 LOC100242586 LOC7480677 LOC7480273 LOC25485144 LOC107916329 LOC107930689 LOC106412303 LOC111202327 LOC102599493 LOC102592139 LOC102623067 LOC102623980 LOC107767577 LOC107761032
Function* TIFY domain/Divergent CCT motif family protein TIFY domain/Divergent CCT motif family protein protein TIFY 4B protein TIFY 4B protein TIFY 4B protein TIFY 4B protein TIFY 4B protein TIFY 4B protein TIFY 4B protein TIFY 4B protein TIFY 4B protein TIFY 4B protein TIFY 4B protein TIFY 4B protein TIFY 4B protein TIFY 4B protein TIFY 4B-like protein TIFY 4B-like protein TIFY 4B-like protein TIFY 4B protein TIFY 4B protein TIFY 4B protein TIFY 4B
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03015 mRNA surveillance pathway 2
bra03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00941 Flavonoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
ghi00999 Biosynthesis of various plant secondary metabolites 2
ghi01230 Biosynthesis of amino acids 2
ghi03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00280 Valine, leucine and isoleucine degradation 2
ghi00410 beta-Alanine metabolism 2
ghi00562 Inositol phosphate metabolism 2
ghi00640 Propanoate metabolism 2
ghi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03020 RNA polymerase 3
bna03420 Nucleotide excision repair 3
bna03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04130 SNARE interactions in vesicular transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00564 Glycerophospholipid metabolism 2
sot00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 2
nta00010 Glycolysis / Gluconeogenesis 2
nta00071 Fatty acid degradation 2
nta00350 Tyrosine metabolism 2
nta00620 Pyruvate metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 827123 827125 100808970 100813937 101259854 101265858 103871821 103833464 100246035 100242586 7480677 7480273 25485144 107916329 107930689 106412303 111202327 102599493 102592139 102623067 102623980 107767577 107761032
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