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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7480405   probable polygalacturonase At1g80170 
 ppo-r.4   7480405   probable polygalacturonase At1g80170 
 ppo-m.4   7480405   probable polygalacturonase At1g80170 
 ppo-u.5   7489119   probable polygalacturonase At1g80170 
 ppo-u.5   18101886   probable polygalacturonase At1g80170 
 gma-u.5   100806068   probable polygalacturonase At1g80170 
 gma-u.5   100804067   probable polygalacturonase At1g80170 
 mtr-u.5   25501371   probable polygalacturonase At1g80170 
 ath-u.5   AT1G23460   Pectin lyase-like superfamily protein 
 ath-u.5   AT1G70500   Pectin lyase-like superfamily protein 
 vvi-u.5   100263605   probable polygalacturonase At1g80170 
 sly-u.5   101248050   probable polygalacturonase At1g80170 
 sly-u.5   101257654   probable polygalacturonase At1g80170 
 osa-u.5   4328189   probable polygalacturonase At1g80170 

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Top 50 coexpressed genes to 7480405 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7480405 (ppo-u.5 coexpression data)

CoexMap"7480405"


ppoLOC7480405 | Entrez gene ID : 7480405    
Species ppo gma mtr ath vvi sly osa sbi nta bra cre hvu cit bdi sot zma tae bna ghi
Paralog 5 2 1 2 1 2 1 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0005975 [list] [network] carbohydrate metabolic process  (863 genes)  IEA  
GO CC
GO MF
GO:0004650 [list] [network] polygalacturonase activity  (77 genes)  IEA  
Protein XP_002299032.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  nucl 1,  mito 1,  plas 1,  extr 1,  E.R. 1,  nucl_plas 1,  E.R._plas 1,  mito_plas 1  (predict for XP_002299032.1)
Subcellular
localization
TargetP
scret 9  (predict for XP_002299032.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7480405

.
ppo-r.4
for
7480405

.
ppo-m.4
for
7480405

.
ppo-u.5
for
7489119

.
ppo-u.5
for
18101886

.
gma-u.5
for
100806068

.
gma-u.5
for
100804067

.
mtr-u.5
for
25501371

.
ath-u.5
for
AT1G23460

.
ath-u.5
for
AT1G70500

.
vvi-u.5
for
100263605

.
sly-u.5
for
101248050

.
sly-u.5
for
101257654

.
osa-u.5
for
4328189

.


Ortholog ID: 4822
Species ath ath gma gma sly sly osa bra bra vvi ppo ppo mtr tae tae hvu ghi ghi bna bna sot sot cit bdi nta nta
Symbol AT1G23460 AT1G70500 LOC100806068 LOC100804067 LOC101248050 LOC101257654 LOC4328189 LOC103835664 LOC103829271 LOC100263605 LOC7480405 LOC7489119 LOC25501371 LOC123136060 LOC123131980 LOC123404704 LOC107909681 LOC107918238 LOC111199832 LOC111199834 LOC102578221 LOC102579939 LOC102623269 LOC100832774 LOC142168648 LOC107789394
Function* Pectin lyase-like superfamily protein Pectin lyase-like superfamily protein probable polygalacturonase At1g80170 probable polygalacturonase At1g80170 probable polygalacturonase At1g80170 probable polygalacturonase At1g80170 probable polygalacturonase At1g80170 probable polygalacturonase At1g80170 probable polygalacturonase At1g80170 probable polygalacturonase At1g80170 probable polygalacturonase At1g80170 probable polygalacturonase At1g80170 probable polygalacturonase At1g80170 probable polygalacturonase At1g80170 probable polygalacturonase At1g80170 probable polygalacturonase At1g80170 probable polygalacturonase At1g80170 probable polygalacturonase At1g80170 probable polygalacturonase At1g80170 probable polygalacturonase At1g80170 probable polygalacturonase At1g80170 probable polygalacturonase At1g80170 probable polygalacturonase At1g80170 probable polygalacturonase At1g80170 putative polygalacturonase At1g80170 putative polygalacturonase At1g80170
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00051 Fructose and mannose metabolism 3
gma00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00051 Fructose and mannose metabolism 3
gma00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00051 Fructose and mannose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00051 Fructose and mannose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00941 Flavonoid biosynthesis 2
hvu04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00564 Glycerophospholipid metabolism 2
ghi00565 Ether lipid metabolism 2
ghi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00564 Glycerophospholipid metabolism 2
ghi00565 Ether lipid metabolism 2
ghi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00520 Amino sugar and nucleotide sugar metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 838954 843386 100806068 100804067 101248050 101257654 4328189 103835664 103829271 100263605 7480405 7489119 25501371 123136060 123131980 123404704 107909681 107918238 111199832 111199834 102578221 102579939 102623269 100832774 142168648 107789394
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