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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7480809   eukaryotic initiation factor 4A-8 
 ppo-r.4   7480809   eukaryotic initiation factor 4A-8 
 ppo-u.5   112325060   eukaryotic initiation factor 4A-15 
 ppo-u.5   7470684   eukaryotic initiation factor 4A-9 
 ppo-u.5   18094831   eukaryotic initiation factor 4A-8 
 gma-u.5   100809395   eukaryotic initiation factor 4A-10 
 gma-u.5   100777628   eukaryotic initiation factor 4A-10 
 gma-u.5   100786735   eukaryotic initiation factor 4A-15-like 
 mtr-u.5   11434749   eukaryotic initiation factor 4A-11 
 mtr-u.5   11444422   eukaryotic initiation factor 4A-10 
 mtr-u.5   25494213   uncharacterized LOC25494213 
 ath-u.5   EIF4A1   eukaryotic translation initiation factor 4A1 
 ath-u.5   EIF4A-2   eif4a-2 
 ath-u.5   AT1G72730   DEA(D/H)-box RNA helicase family protein 
 vvi-u.5   100261822   eukaryotic initiation factor 4A-8 
 vvi-u.5   100249159   eukaryotic initiation factor 4A-11 
 sly-u.5   101252510   eukaryotic initiation factor 4A-2 
 sly-u.5   101266108   eukaryotic initiation factor 4A-2 
 sly-u.5   101266405   eukaryotic initiation factor 4A-2 
 osa-u.5   4341966   eukaryotic initiation factor 4A-1-like 
 osa-u.5   4328286   eukaryotic initiation factor 4A-3-like 
 zma-u.5   100284697   uncharacterized LOC100284697 
 zma-u.5   541649   translation initiation factor 
 zma-u.5   542348   translational initiation factor eIF-4A 

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Top 50 coexpressed genes to 7480809 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7480809 (ppo-u.5 coexpression data)

CoexMap"7480809"


ppoLOC7480809 | Entrez gene ID : 7480809    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 5 3 3 3 2 3 2 3 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0002183 [list] [network] cytoplasmic translational initiation  (22 genes)  IEA  
GO CC
GO:0010494 [list] [network] cytoplasmic stress granule  (10 genes)  IEA  
GO MF
GO:0003724 [list] [network] RNA helicase activity  (68 genes)  IEA  
GO:0003743 [list] [network] translation initiation factor activity  (90 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (2559 genes)  IEA  
Protein XP_002304185.2 [sequence] [blastp]
Subcellular
localization
wolf
cyto 8,  chlo 1,  pero 1,  cysk 1  (predict for XP_002304185.2)
Subcellular
localization
TargetP
other 9  (predict for XP_002304185.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7480809

.
ppo-r.4
for
7480809

.
ppo-u.5
for
112325060

.
ppo-u.5
for
7470684

.
ppo-u.5
for
18094831

.
gma-u.5
for
100809395

.
gma-u.5
for
100777628

.
gma-u.5
for
100786735

.
mtr-u.5
for
11434749

.
mtr-u.5
for
11444422

.
mtr-u.5
for
25494213

.
ath-u.5
for
EIF4A1

.
ath-u.5
for
EIF4A-2

.
ath-u.5
for
AT1G72730

.
vvi-u.5
for
100261822

.
vvi-u.5
for
100249159

.
sly-u.5
for
101252510

.
sly-u.5
for
101266108

.
sly-u.5
for
101266405

.
osa-u.5
for
4341966

.
osa-u.5
for
4328286

.
zma-u.5
for
100284697

.
zma-u.5
for
541649

.
zma-u.5
for
542348

.


Ortholog ID: 725
Species ath ath gma gma sly sly osa zma zma bra bra vvi vvi ppo ppo mtr mtr tae tae hvu hvu ghi ghi bna bna cre sbi sot cit bdi bdi nta nta
Symbol AT1G72730 EIF4A1 LOC112999960 LOC100817948 LOC104648456 LOC101244494 LOC4328286 LOC100284697 LOC542348 LOC103832621 LOC103871060 LOC100249159 LOC100261822 LOC7470684 LOC112325060 LOC11418913 LOC25494213 LOC123137029 LOC123136268 LOC123407112 LOC123413668 LOC107891725 LOC107920144 LOC125602317 LOC106405668 CHLRE_06g298650v5 LOC8063831 LOC102595924 LOC102621232 LOC100844546 LOC100843793 LOC107777566 LOC107798115
Function* DEA(D/H)-box RNA helicase family protein eukaryotic translation initiation factor 4A1 eukaryotic initiation factor 4A-15 eukaryotic initiation factor 4A-10 eukaryotic initiation factor 4A-9-like eukaryotic initiation factor 4A-8 eukaryotic initiation factor 4A-3-like uncharacterized LOC100284697 translational initiation factor eIF-4A eukaryotic initiation factor 4A-1 eukaryotic initiation factor 4A-1 eukaryotic initiation factor 4A-11 eukaryotic initiation factor 4A-8 eukaryotic initiation factor 4A-9 eukaryotic initiation factor 4A-15 eukaryotic initiation factor 4A-10 uncharacterized LOC25494213 uncharacterized LOC123137029 eukaryotic initiation factor 4A-like ATP-dependent RNA helicase drs1-like eukaryotic initiation factor 4A eukaryotic initiation factor 4A-8 eukaryotic initiation factor 4A-14 eukaryotic initiation factor 4A-1-like eukaryotic initiation factor 4A-3 uncharacterized protein eukaryotic initiation factor 4A-3 eukaryotic initiation factor 4A-15 eukaryotic initiation factor 4A-8 eukaryotic initiation factor 4A eukaryotic initiation factor 4A-1 eukaryotic initiation factor 4A-9-like eukaryotic initiation factor 4A-14-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 5
ath01240 Biosynthesis of cofactors 3
ath00520 Amino sugar and nucleotide sugar metabolism 3
ath01250 Biosynthesis of nucleotide sugars 3
ath00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04814 Motor proteins 3
ath03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 8
gma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00190 Oxidative phosphorylation 2
gma04145 Phagosome 2
gma04144 Endocytosis 2
gma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 2
sly03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00510 N-Glycan biosynthesis 3
sly00513 Various types of N-glycan biosynthesis 3
sly04141 Protein processing in endoplasmic reticulum 3
sly04626 Plant-pathogen interaction 3
sly04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01200 Carbon metabolism 3
osa03015 mRNA surveillance pathway 2
osa00020 Citrate cycle (TCA cycle) 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 4
zma03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 7
zma03013 Nucleocytoplasmic transport 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03050 Proteasome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04144 Endocytosis 2
ppo03050 Proteasome 2
ppo03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 6
mtr03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00970 Aminoacyl-tRNA biosynthesis 3
mtr03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00020 Citrate cycle (TCA cycle) 2
tae00310 Lysine degradation 2
tae00380 Tryptophan metabolism 2
tae00785 Lipoic acid metabolism 2
tae01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03018 RNA degradation 2
hvu03013 Nucleocytoplasmic transport 2
hvu03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 3
hvu03040 Spliceosome 2
hvu04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00290 Valine, leucine and isoleucine biosynthesis 2
ghi00770 Pantothenate and CoA biosynthesis 2
ghi01210 2-Oxocarboxylic acid metabolism 2
ghi01230 Biosynthesis of amino acids 2
ghi03030 DNA replication 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00290 Valine, leucine and isoleucine biosynthesis 2
ghi00770 Pantothenate and CoA biosynthesis 2
ghi01210 2-Oxocarboxylic acid metabolism 2
ghi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 15
cre01230 Biosynthesis of amino acids 3
cre03013 Nucleocytoplasmic transport 2
cre00220 Arginine biosynthesis 2
cre00250 Alanine, aspartate and glutamate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 10
cit04120 Ubiquitin mediated proteolysis 3
cit04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04141 Protein processing in endoplasmic reticulum 3
bdi04144 Endocytosis 3
bdi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04141 Protein processing in endoplasmic reticulum 2
bdi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 3
nta03010 Ribosome 2
nta03013 Nucleocytoplasmic transport 2
nta03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 2
nta03015 mRNA surveillance pathway 2
nta03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 843605 820605 112999960 100817948 104648456 101244494 4328286 100284697 542348 103832621 103871060 100249159 100261822 7470684 112325060 11418913 25494213 123137029 123136268 123407112 123413668 107891725 107920144 125602317 106405668 5717011 8063831 102595924 102621232 100844546 100843793 107777566 107798115
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