ATTED-II : GeneCoexpression result

Species	Gene	Description
ppo-u.5	7481526	uncharacterized LOC7481526
ppo-r.4	7481526	uncharacterized LOC7481526
ppo-m.4	7481526	uncharacterized LOC7481526
ppo-u.5	7485695	uncharacterized LOC7485695
gma-u.5	100814215	uncharacterized LOC100814215
gma-u.5	100781970	uncharacterized LOC100781970
mtr-u.5	11410799	protein-S-isoprenylcysteine O-methyltransferase
ath-u.5	AT5G59500	protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase
bra-r.6	103845374	uncharacterized LOC103845374
vvi-u.5	100255385	uncharacterized LOC100255385
ghi-r.1	107959130	uncharacterized LOC107959130
ghi-r.1	107906569	uncharacterized LOC107906569
bna-r.1	106420529	uncharacterized LOC106420529
bna-r.1	BNAC09G34810D	uncharacterized BNAC09G34810D
cit-r.1	102607496	uncharacterized LOC102607496
sot-r.1	102605130	uncharacterized LOC102605130
nta-r.1	107789102	uncharacterized LOC107789102
nta-r.1	107793512	uncharacterized LOC107793512
cre-r.1	CHLRE_01g049750v5	uncharacterized protein

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_002314167.1 [sequence] [blastp]
XP_024464004.1 [sequence] [blastp]

Subcellular
localization
wolf

plas 6, chlo_mito 1, chlo 1, mito 1, E.R. 1, pero 1	(predict for XP_002314167.1)
plas 6, chlo_mito 1, chlo 1, mito 1, E.R. 1, pero 1	(predict for XP_024464004.1)

Subcellular
localization
TargetP

chlo 8	(predict for XP_002314167.1)
chlo 8	(predict for XP_024464004.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ppo-u.5 for 7481526	ppo-r.4 for 7481526	ppo-m.4 for 7481526	ppo-u.5 for 7485695	gma-u.5 for 100814215	gma-u.5 for 100781970	mtr-u.5 for 11410799	ath-u.5 for AT5G59500	bra-r.6 for 103845374	vvi-u.5 for 100255385	ghi-r.1 for 107959130	ghi-r.1 for 107906569	bna-r.1 for 106420529	bna-r.1 for BNAC09G34810D	cit-r.1 for 102607496	sot-r.1 for 102605130	nta-r.1 for 107789102	nta-r.1 for 107793512	cre-r.1 for CHLRE_01g049750v5

Ortholog

Ortholog ID: 12683

Species

ppo

gma

mtr

ath

bra

vvi

ghi

bna

cit

sot

nta

cre

Symbol

Function^*

uncharacterized LOC7481526

uncharacterized LOC7485695

uncharacterized LOC100814215

uncharacterized LOC100781970

protein-S-isoprenylcysteine O-methyltransferase

protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase

uncharacterized LOC103845374

uncharacterized LOC100255385

uncharacterized LOC107959130

uncharacterized LOC107906569

uncharacterized LOC106420529

uncharacterized BNAC09G34810D

uncharacterized LOC102607496

uncharacterized LOC102605130

uncharacterized LOC107789102

uncharacterized LOC107793512

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo01240	Biosynthesis of cofactors	3
ppo03010	Ribosome	2
ppo00240	Pyrimidine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo01240	Biosynthesis of cofactors	4
ppo03010	Ribosome	2
ppo00240	Pyrimidine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00240	Pyrimidine metabolism	2
gma00670	One carbon pool by folate	2
gma00790	Folate biosynthesis	2
gma01232	Nucleotide metabolism	2
gma01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03010	Ribosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi01240	Biosynthesis of cofactors	3
vvi00061	Fatty acid biosynthesis	2
vvi00780	Biotin metabolism	2
vvi01212	Fatty acid metabolism	2
vvi03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi01230	Biosynthesis of amino acids	7
ghi00300	Lysine biosynthesis	3
ghi00470	D-Amino acid metabolism	3
ghi00340	Histidine metabolism	2
ghi00260	Glycine, serine and threonine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi01230	Biosynthesis of amino acids	7
ghi00300	Lysine biosynthesis	3
ghi00470	D-Amino acid metabolism	3
ghi00340	Histidine metabolism	2
ghi00260	Glycine, serine and threonine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna01230	Biosynthesis of amino acids	5
bna00300	Lysine biosynthesis	4
bna04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna01230	Biosynthesis of amino acids	9
bna00300	Lysine biosynthesis	5
bna00220	Arginine biosynthesis	4
bna00740	Riboflavin metabolism	4
bna01240	Biosynthesis of cofactors	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00061	Fatty acid biosynthesis	3
cit01212	Fatty acid metabolism	3
cit03010	Ribosome	3
cit01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00330	Arginine and proline metabolism	2
nta01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00330	Arginine and proline metabolism	2
nta01230	Biosynthesis of amino acids	2

Expression

Expression pattern

Entrez Gene ID^*

7481526

7485695

100814215

100781970

11410799

836069

103845374

100255385

107959130

107906569

106420529

106418573

102607496

102605130

107789102

107793512

5715725

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 7481526 (ppo-u.5 coexpression data)

Top 50 enrichment test to 7481526 (ppo-u.5 coexpression data)


Species	ppo	gma	mtr	ath	bra	vvi	ghi	bna	cit	sot	nta	cre	tae	zma	sly	bdi	osa	sbi	hvu
Paralog	4	2	1	1	1	1	2	2	1	1	2	1	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 7481526 (ppo-u.5 coexpression data)

Top 50 enrichment test to 7481526 (ppo-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**