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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7482483   uncharacterized LOC7482483 
 ppo-r.4   7482483   uncharacterized LOC7482483 
 ppo-m.4   7482483   uncharacterized LOC7482483 
 gma-u.5   100791222   lipoate-protein ligase LplJ 
 mtr-u.5   25485533   putative lipoate-protein ligase A 
 mtr-u.5   11420323   uncharacterized LOC11420323 
 ath-u.5   AT3G29010   Biotin/lipoate A/B protein ligase family 
 vvi-u.5   100245023   uncharacterized LOC100245023 
 sly-u.5   101252893   uncharacterized LOC101252893 
 osa-u.5   4345662   uncharacterized LOC4345662 
 zma-u.5   100383290   Biotin/lipoate A/B protein ligase family 

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Top 50 coexpressed genes to 7482483 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7482483 (ppo-u.5 coexpression data)

CoexMap"7482483"


ppoLOC7482483 | Entrez gene ID : 7482483    
Species ppo gma mtr ath vvi sly osa zma cre ghi cit hvu bdi sot bra sbi tae nta bna
Paralog 3 1 2 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0036211 [list] [network] protein modification process  (2435 genes)  IEA  
GO CC
GO:0005739 [list] [network] mitochondrion  (675 genes)  IEA  
GO MF
Protein XP_002323867.1 [sequence] [blastp]
XP_006373326.1 [sequence] [blastp]
XP_024444212.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  cyto 3,  cysk_nucl 3  (predict for XP_002323867.1)
cyto 6,  cyto_E.R. 4,  chlo 1,  nucl 1,  golg 1,  chlo_mito 1  (predict for XP_006373326.1)
cyto 6,  cyto_E.R. 4,  chlo 1,  nucl 1,  golg 1,  chlo_mito 1  (predict for XP_024444212.1)
Subcellular
localization
TargetP
other 3,  scret 3  (predict for XP_002323867.1)
scret 7,  other 3  (predict for XP_006373326.1)
scret 7,  other 3  (predict for XP_024444212.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7482483

.
ppo-r.4
for
7482483

.
ppo-m.4
for
7482483

.
gma-u.5
for
100791222

.
mtr-u.5
for
25485533

.
mtr-u.5
for
11420323

.
ath-u.5
for
AT3G29010

.
vvi-u.5
for
100245023

.
sly-u.5
for
101252893

.
osa-u.5
for
4345662

.
zma-u.5
for
100383290

.


Ortholog ID: 8969
Species ath gma sly osa zma bra bra vvi ppo mtr mtr tae hvu ghi bna bna cre sbi sot cit bdi nta nta
Symbol AT3G29010 LOC100791222 LOC101252893 LOC4345662 LOC100383290 LOC103875108 LOC103863909 LOC100245023 LOC7482483 LOC11420323 LOC25485533 LOC123054885 LOC123428096 LOC107953506 BNAC04G31740D LOC106349139 CHLRE_01g053750v5 LOC110437217 LOC102592930 LOC102617401 LOC100838915 LOC107824692 LOC107799435
Function* Biotin/lipoate A/B protein ligase family lipoate-protein ligase LplJ uncharacterized LOC101252893 uncharacterized LOC4345662 Biotin/lipoate A/B protein ligase family lipoate-protein ligase LplJ uncharacterized LOC103863909 uncharacterized LOC100245023 uncharacterized LOC7482483 uncharacterized LOC11420323 putative lipoate-protein ligase A lipoate-protein ligase A lipoate-protein ligase A putative lipoate-protein ligase A lipoate--protein ligase 1 lipoate-protein ligase LplJ uncharacterized protein uncharacterized LOC110437217 uncharacterized LOC102592930 uncharacterized LOC102617401 lipoate-protein ligase A uncharacterized LOC107824692 uncharacterized LOC107799435
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00280 Valine, leucine and isoleucine degradation 2
gma00410 beta-Alanine metabolism 2
gma00640 Propanoate metabolism 2
gma01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00940 Phenylpropanoid biosynthesis 4
sly00400 Phenylalanine, tyrosine and tryptophan biosynthesis 4
sly01230 Biosynthesis of amino acids 4
sly00360 Phenylalanine metabolism 2
sly00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03013 Nucleocytoplasmic transport 4
osa03008 Ribosome biogenesis in eukaryotes 2
osa03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 3
bra04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03013 Nucleocytoplasmic transport 3
ppo03040 Spliceosome 2
ppo03050 Proteasome 2
ppo03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04712 Circadian rhythm - plant 2
mtr03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01230 Biosynthesis of amino acids 9
tae00260 Glycine, serine and threonine metabolism 6
tae00270 Cysteine and methionine metabolism 6
tae01200 Carbon metabolism 6
tae03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03050 Proteasome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00540 Lipopolysaccharide biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03022 Basal transcription factors 2
bna03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03050 Proteasome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00900 Terpenoid backbone biosynthesis 4
sot00280 Valine, leucine and isoleucine degradation 2
sot00650 Butanoate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04144 Endocytosis 2
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 4
bdi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00230 Purine metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 822541 100791222 101252893 4345662 100383290 103875108 103863909 100245023 7482483 11420323 25485533 123054885 123428096 107953506 106432337 106349139 5715801 110437217 102592930 102617401 100838915 107824692 107799435
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