ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ppo-u.5	7483235	uncharacterized LOC7483235
ppo-r.4	7483235	uncharacterized LOC7483235
ppo-m.4	7483235	uncharacterized LOC7483235
ppo-u.5	18095018	uncharacterized LOC18095018
ppo-u.5	7461352	uncharacterized LOC7461352
gma-u.5	100776799	uncharacterized LOC100776799
gma-u.5	100809342	uncharacterized LOC100809342
gma-u.5	100813504	uncharacterized LOC100813504
mtr-u.5	11411399	uncharacterized LOC11411399
mtr-u.5	11418598	uncharacterized LOC11418598
ath-u.5	AT3G13510	carboxyl-terminal peptidase, putative (DUF239)
ath-u.5	AT5G56530	tRNA-splicing ligase (DUF239)
ath-u.5	AT1G55360	tRNA-splicing ligase (DUF239)
bra-r.6	103851819	uncharacterized LOC103851819
bra-r.6	103870125	uncharacterized LOC103870125
vvi-u.5	100267227	protein neprosin
vvi-u.5	100247715	protein neprosin
ghi-r.1	107955489	uncharacterized LOC107955489
ghi-r.1	107907392	uncharacterized LOC107907392
ghi-r.1	121217390	uncharacterized LOC121217390
bna-r.1	106452284	uncharacterized LOC106452284
bna-r.1	111212106	uncharacterized LOC111212106
bna-r.1	106371459	uncharacterized LOC106371459
cit-r.1	102622799	hypothetical protein
sly-u.5	101253614	protein neprosin
sly-u.5	101264758	protein neprosin
sot-r.1	102588515	uncharacterized LOC102588515
sot-r.1	102591027	uncharacterized LOC102591027
nta-r.1	107782329	protein neprosin
nta-r.1	107783198	protein neprosin
nta-r.1	107808928	protein neprosin-like
osa-u.5	4334507	protein neprosin
osa-u.5	4342683	protein neprosin
osa-u.5	4343684	protein neprosin
zma-u.5	100279515	uncharacterized LOC100279515
zma-u.5	100285736	carboxyl-terminal peptidase
zma-u.5	103652694	NEP-interacting protein 1
tae-r.2	123123350	uncharacterized LOC123123350
tae-r.2	123113843	uncharacterized LOC123113843
tae-r.2	123105533	uncharacterized LOC123105533
hvu-r.1	123425601	uncharacterized LOC123425601
hvu-r.1	123399598	uncharacterized LOC123399598
hvu-r.1	123452871	uncharacterized LOC123452871
sbi-r.1	8070245	uncharacterized LOC8070245
sbi-r.1	8055676	uncharacterized LOC8055676
sbi-r.1	110435350	uncharacterized LOC110435350
bdi-r.1	100829993	uncharacterized LOC100829993
bdi-r.1	100835968	uncharacterized LOC100835968
bdi-r.1	100823659	uncharacterized LOC100823659

Top 50 coexpressed genes to 7483235 (ppo-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 7483235 (ppo-u.5 coexpression data)

CoexMap"7483235"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_002297622.2 [sequence] [blastp]

Subcellular
localization
wolf

vacu 5, chlo 1, nucl 1, plas 1, extr 1, golg 1, cyto_nucl 1, chlo_mito 1, cysk_nucl 1, golg_plas 1

(predict for XP_002297622.2)

Subcellular
localization
TargetP

scret 6, mito 4

(predict for XP_002297622.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ppo-u.5 for 7483235	ppo-r.4 for 7483235	ppo-m.4 for 7483235	ppo-u.5 for 18095018	ppo-u.5 for 7461352	gma-u.5 for 100776799	gma-u.5 for 100809342	gma-u.5 for 100813504	mtr-u.5 for 11411399	mtr-u.5 for 11418598	ath-u.5 for AT3G13510	ath-u.5 for AT5G56530	ath-u.5 for AT1G55360	bra-r.6 for 103851819	bra-r.6 for 103870125	vvi-u.5 for 100267227	vvi-u.5 for 100247715	ghi-r.1 for 107955489	ghi-r.1 for 107907392	ghi-r.1 for 121217390	bna-r.1 for 106452284	bna-r.1 for 111212106	bna-r.1 for 106371459	cit-r.1 for 102622799	sly-u.5 for 101253614	sly-u.5 for 101264758	sot-r.1 for 102588515	sot-r.1 for 102591027	nta-r.1 for 107782329	nta-r.1 for 107783198	nta-r.1 for 107808928	osa-u.5 for 4334507	osa-u.5 for 4342683	osa-u.5 for 4343684	zma-u.5 for 100279515	zma-u.5 for 100285736	zma-u.5 for 103652694	tae-r.2 for 123123350	tae-r.2 for 123113843	tae-r.2 for 123105533	hvu-r.1 for 123425601	hvu-r.1 for 123399598	hvu-r.1 for 123452871	sbi-r.1 for 8070245	sbi-r.1 for 8055676	sbi-r.1 for 110435350	bdi-r.1 for 100829993	bdi-r.1 for 100835968	bdi-r.1 for 100823659

Ortholog

Ortholog ID: 1856

Species

ppo

gma

mtr

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

uncharacterized LOC7483235

uncharacterized LOC18095018

uncharacterized LOC7461352

uncharacterized LOC100776799

uncharacterized LOC100809342

uncharacterized LOC100790139

uncharacterized LOC11411399

uncharacterized LOC11418598

carboxyl-terminal peptidase, putative (DUF239)

tRNA-splicing ligase (DUF239)

uncharacterized LOC103851819

uncharacterized LOC103870125

uncharacterized LOC103832590

protein neprosin

uncharacterized LOC107955489

uncharacterized LOC107907392

uncharacterized LOC121217390

uncharacterized LOC106452284

uncharacterized LOC106382105

uncharacterized LOC106433602

hypothetical protein

protein neprosin

uncharacterized LOC102588515

uncharacterized LOC102591027

protein neprosin

protein neprosin-like

protein neprosin

carboxyl-terminal peptidase

NEP-interacting protein 1

uncharacterized LOC100272482

uncharacterized LOC123052323

uncharacterized LOC123117827

uncharacterized LOC123126295

uncharacterized LOC123425601

uncharacterized LOC123399598

uncharacterized LOC123452871

uncharacterized LOC8070245

uncharacterized LOC8055676

uncharacterized LOC110435350

uncharacterized LOC100829993

uncharacterized LOC100835968

uncharacterized LOC100823659

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03020	RNA polymerase	2
gma04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04145	Phagosome	3
ath04517	IgSF CAM signaling	3
ath04814	Motor proteins	3
ath04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	5
vvi00860	Porphyrin metabolism	4
vvi01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna01230	Biosynthesis of amino acids	3
bna00250	Alanine, aspartate and glutamate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00910	Nitrogen metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00460	Cyanoamino acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00940	Phenylpropanoid biosynthesis	8
sbi00910	Nitrogen metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04814	Motor proteins	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04814	Motor proteins	3

Expression

Expression pattern

Entrez Gene ID^*

7483235

18095018

7461352

100776799

100809342

100790139

11411399

11418598

820553

835754

841982

103851819

103870125

103832590

100267227

100247715

107955489

107907392

121217390

106452284

106382105

106433602

102622799

101253614

101264758

102588515

102591027

107783198

107817004

107790875

4334507

4342683

4343684

100285736

103652694

100272482

123052323

123117827

123126295

123425601

123399598

123452871

8070245

8055676

110435350

100829993

100835968

100823659

The preparation time of this page was 0.2 [sec].


Species	ppo	gma	mtr	ath	bra	vvi	ghi	bna	cit	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	5	3	2	3	2	2	3	3	1	2	2	3	3	3	3	3	3	3	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 7483235 (ppo-u.5 coexpression data)

Top 50 enrichment test to 7483235 (ppo-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**