Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7484706   DNA mismatch repair protein MSH2 
 ppo-r.4   7484706   DNA mismatch repair protein MSH2 
 ppo-m.4   7484706   DNA mismatch repair protein MSH2 
 gma-u.5   100792272   DNA mismatch repair protein MSH2 
 mtr-u.5   25493936   DNA mismatch repair protein MSH2 
 ath-u.5   MSH2   MUTS homolog 2 
 vvi-u.5   MSH2   mismatch repair protein 
 sly-u.5   MSH2   mismatch repair protein 
 osa-u.5   4338271   DNA mismatch repair protein MSH2 
 zma-u.5   100279876   MutS homolog 1 

close


Top 50 coexpressed genes to 7484706 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 7484706 (ppo-u.5 coexpression data)

CoexMap"7484706"


ppoLOC7484706 | Entrez gene ID : 7484706    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 3 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG pop03430 [list] [network] Mismatch repair (40 genes)
GO BP
GO:0006312 [list] [network] mitotic recombination  (10 genes)  IEA  
GO:0006298 [list] [network] mismatch repair  (21 genes)  IEA  
GO CC
GO:0032301 [list] [network] MutSalpha complex  (3 genes)  IEA  
GO:0005634 [list] [network] nucleus  (3662 genes)  IEA  
GO MF
GO:0030983 [list] [network] mismatched DNA binding  (16 genes)  IEA  
GO:0140664 [list] [network] ATP-dependent DNA damage sensor activity  (25 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (2559 genes)  IEA  
Protein XP_002317931.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  nucl 4  (predict for XP_002317931.1)
Subcellular
localization
TargetP
other 9  (predict for XP_002317931.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7484706

.
ppo-r.4
for
7484706

.
ppo-m.4
for
7484706

.
gma-u.5
for
100792272

.
mtr-u.5
for
25493936

.
ath-u.5
for
MSH2

.
vvi-u.5
for
MSH2

.
sly-u.5
for
MSH2

.
osa-u.5
for
4338271

.
zma-u.5
for
100279876

.


Ortholog ID: 10784
Species ath gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol MSH2 LOC100792272 MSH2 LOC4338271 LOC100279876 LOC103859754 MSH2 LOC7484706 LOC25493936 LOC542978 LOC123117237 LOC123428016 LOC107897679 LOC107888755 LOC106439551 LOC106360022 CHLRE_01g003463v5 LOC8060623 LOC102598532 LOC102614656 LOC100842311 LOC107825761 LOC107772597
Function* MUTS homolog 2 DNA mismatch repair protein MSH2 mismatch repair protein DNA mismatch repair protein MSH2 MutS homolog 1 DNA mismatch repair protein MSH2 mismatch repair protein DNA mismatch repair protein MSH2 DNA mismatch repair protein MSH2 DNA mismatch repair protein MSH2 DNA mismatch repair protein MSH2 DNA mismatch repair protein MSH2 DNA mismatch repair protein MSH2 DNA mismatch repair protein MSH2 DNA mismatch repair protein MSH2 DNA mismatch repair protein MSH2 uncharacterized protein DNA mismatch repair protein MSH2 DNA mismatch repair protein MSH2 DNA mismatch repair protein MSH2 DNA mismatch repair protein MSH2 DNA mismatch repair protein MSH2 DNA mismatch repair protein MSH2
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03030 DNA replication 7
ath03430 Mismatch repair 4
ath03410 Base excision repair 2
ath03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03013 Nucleocytoplasmic transport 3
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03030 DNA replication 10
sly03430 Mismatch repair 3
sly03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03430 Mismatch repair 6
zma03030 DNA replication 5
zma03410 Base excision repair 4
zma03420 Nucleotide excision repair 4
zma00270 Cysteine and methionine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03430 Mismatch repair 5
bra03030 DNA replication 4
bra03410 Base excision repair 3
bra03420 Nucleotide excision repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03430 Mismatch repair 8
vvi03030 DNA replication 7
vvi03420 Nucleotide excision repair 7
vvi03410 Base excision repair 5
vvi03440 Homologous recombination 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03030 DNA replication 5
ppo00230 Purine metabolism 3
ppo00240 Pyrimidine metabolism 3
ppo00480 Glutathione metabolism 3
ppo01232 Nucleotide metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03430 Mismatch repair 3
mtr03030 DNA replication 2
mtr03410 Base excision repair 2
mtr03420 Nucleotide excision repair 2
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 11
tae03430 Mismatch repair 5
tae00270 Cysteine and methionine metabolism 4
tae03410 Base excision repair 4
tae03420 Nucleotide excision repair 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 7
tae03430 Mismatch repair 6
tae00270 Cysteine and methionine metabolism 4
tae03410 Base excision repair 2
tae03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03430 Mismatch repair 4
ghi03082 ATP-dependent chromatin remodeling 2
ghi03030 DNA replication 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03430 Mismatch repair 4
ghi03082 ATP-dependent chromatin remodeling 2
ghi03030 DNA replication 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03030 DNA replication 8
bna03430 Mismatch repair 8
bna03410 Base excision repair 3
bna03420 Nucleotide excision repair 3
bna03440 Homologous recombination 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03430 Mismatch repair 11
bna03030 DNA replication 9
bna03410 Base excision repair 4
bna03420 Nucleotide excision repair 4
bna03440 Homologous recombination 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03030 DNA replication 8
cre03410 Base excision repair 6
cre03420 Nucleotide excision repair 5
cre03430 Mismatch repair 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03030 DNA replication 5
sot03430 Mismatch repair 4
sot03440 Homologous recombination 3
sot03410 Base excision repair 3
sot03420 Nucleotide excision repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00500 Starch and sucrose metabolism 2
cit03013 Nucleocytoplasmic transport 2
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00230 Purine metabolism 2
bdi00240 Pyrimidine metabolism 2
bdi00480 Glutathione metabolism 2
bdi01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00561 Glycerolipid metabolism 4
nta04141 Protein processing in endoplasmic reticulum 2
nta00566 Sulfoquinovose metabolism 2
nta04016 MAPK signaling pathway - plant 2
nta03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00561 Glycerolipid metabolism 4
nta04141 Protein processing in endoplasmic reticulum 2
nta00566 Sulfoquinovose metabolism 2
nta04016 MAPK signaling pathway - plant 2
nta03430 Mismatch repair 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 821383 100792272 100462655 4338271 100279876 103859754 100268052 7484706 25493936 542978 123117237 123428016 107897679 107888755 106439551 106360022 5723679 8060623 102598532 102614656 100842311 107825761 107772597
The preparation time of this page was 0.1 [sec].