ATTED-II : GeneCoexpression result

Species	Gene	Description
ppo-u.5	7474870	E2F transcription factor-like E2FE
gma-u.5	100776170	E2F transcription factor-like E2FE
gma-u.5	100795252	E2F transcription factor-like E2FE
gma-u.5	100806151	E2F transcription factor-like E2FE
mtr-u.5	11405587	E2F transcription factor-like E2FE
ath-u.5	DEL3	DP-E2F-like protein 3
ath-u.5	DEL1	DP-E2F-like 1
vvi-u.5	100241701	E2F transcription factor-like E2FE
vvi-u.5	100266295	E2F transcription factor-like E2FF
sly-u.5	101259523	E2F transcription factor-like E2FE
osa-u.5	4340638	E2F transcription factor-like E2FE
osa-u.5	4330674	E2F transcription factor-like E2FE
zma-u.5	103627702	E2F transcription factor-like E2FE
zma-u.5	100381405	uncharacterized LOC100381405
zma-u.5	103629955	E2F transcription factor-like E2FE

Annotation

functional annotation

KEGG

GO BP

GO:0006357 [list] [network] regulation of transcription by RNA polymerase II

(481 genes)

IEA

GO CC

GO:0090575 [list] [network] RNA polymerase II transcription regulator complex

(103 genes)

IEA

GO MF

GO:0000978 [list] [network] RNA polymerase II cis-regulatory region sequence-specific DNA binding	(266 genes)	IEA
GO:0000981 [list] [network] DNA-binding transcription factor activity, RNA polymerase II-specific	(338 genes)	IEA

Protein

XP_002318015.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 7, cyto 1, mito 1, pero 1, cyto_E.R. 1, cyto_plas 1

(predict for XP_002318015.1)

Subcellular
localization
TargetP

other 7

(predict for XP_002318015.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ppo-u.5 for 7474870	gma-u.5 for 100776170	gma-u.5 for 100795252	gma-u.5 for 100806151	mtr-u.5 for 11405587	ath-u.5 for DEL3	ath-u.5 for DEL1	vvi-u.5 for 100241701	vvi-u.5 for 100266295	sly-u.5 for 101259523	osa-u.5 for 4340638	osa-u.5 for 4330674	zma-u.5 for 103627702	zma-u.5 for 100381405	zma-u.5 for 103629955

Ortholog

Ortholog ID: 3805

Species

ppo

gma

mtr

ath

bra

vvi

ghi

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

DEL1

DEL3

Function^*

E2F transcription factor-like E2FE

DP-E2F-like 1

DP-E2F-like protein 3

E2F transcription factor-like E2FE

E2F transcription factor-like E2FF

E2F transcription factor-like E2FE

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04814	Motor proteins	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03030	DNA replication	2
gma00240	Pyrimidine metabolism	2
gma01232	Nucleotide metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03030	DNA replication	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03030	DNA replication	5
ath03440	Homologous recombination	5
ath03420	Nucleotide excision repair	4
ath03430	Mismatch repair	4
ath03460	Fanconi anemia pathway	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03030	DNA replication	5
bra03430	Mismatch repair	3
bra03420	Nucleotide excision repair	2
bra03440	Homologous recombination	2
bra03460	Fanconi anemia pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00900	Terpenoid backbone biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03440	Homologous recombination	4
ghi03460	Fanconi anemia pathway	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03030	DNA replication	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03460	Fanconi anemia pathway	2
sly03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03030	DNA replication	4
sot03440	Homologous recombination	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03082	ATP-dependent chromatin remodeling	4
nta04814	Motor proteins	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00240	Pyrimidine metabolism	3
nta01232	Nucleotide metabolism	3
nta03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04814	Motor proteins	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04814	Motor proteins	2
osa03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03030	DNA replication	4
zma04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03030	DNA replication	12
tae00270	Cysteine and methionine metabolism	3
tae03420	Nucleotide excision repair	2
tae03440	Homologous recombination	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03030	DNA replication	6
sbi04814	Motor proteins	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04814	Motor proteins	5
bdi03030	DNA replication	3
bdi03440	Homologous recombination	2

Expression

Expression pattern

Entrez Gene ID^*

7474870

100806151

100795252

11405587

823971

821221

103873170

103874205

100241701

100266295

107892314

107909589

102616581

101259523

102579077

107826836

107759854

4340638

4330674

103629955

103627702

780584

123413132

123403693

8061495

100821685

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 7474870 (ppo-u.5 coexpression data)

Top 50 enrichment test to 7474870 (ppo-u.5 coexpression data)


Species	ppo	gma	mtr	ath	vvi	sly	osa	zma	bdi	hvu	bra	cit	bna	sbi	ghi	sot	nta	cre	tae
Paralog	1	3	1	2	2	1	2	3	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 7474870 (ppo-u.5 coexpression data)

Top 50 enrichment test to 7474870 (ppo-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**