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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7484893   probable beta-1,4-xylosyltransferase IRX10L 
 ppo-r.4   7484893   probable beta-1,4-xylosyltransferase IRX10L 
 ppo-u.5   7491436   probable beta-1,4-xylosyltransferase IRX10 
 ppo-u.5   7496525   probable beta-1,4-xylosyltransferase IRX10 
 gma-u.5   100800085   probable beta-1,4-xylosyltransferase IRX10L 
 gma-u.5   100812747   probable beta-1,4-xylosyltransferase IRX10L 
 gma-u.5   100797122   probable beta-1,4-xylosyltransferase IRX10L 
 mtr-u.5   25501977   probable beta-1,4-xylosyltransferase IRX10L 
 mtr-u.5   25501976   probable beta-1,4-xylosyltransferase IRX10L 
 ath-u.5   GUT1   Exostosin family protein 
 ath-u.5   GUT2   Exostosin family protein 
 vvi-u.5   100852698   probable beta-1,4-xylosyltransferase IRX10L 
 vvi-u.5   100242415   probable beta-1,4-xylosyltransferase IRX10L 
 sly-u.5   101250897   probable beta-1,4-xylosyltransferase IRX10L 
 sly-u.5   101252560   probable beta-1,4-xylosyltransferase IRX10L 
 sly-u.5   101253484   probable beta-1,4-xylosyltransferase IRX10L 
 osa-u.5   9269523   probable glucuronosyltransferase Os02g0520750 
 osa-u.5   4335711   probable glucuronosyltransferase Os04g0398600 
 osa-u.5   4327240   probable glucuronosyltransferase Os01g0926400 
 zma-u.5   100281324   uncharacterized LOC100281324 
 zma-u.5   100282889   uncharacterized LOC100282889 
 zma-u.5   100191546   uncharacterized LOC100191546 

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Top 50 coexpressed genes to 7484893 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7484893 (ppo-u.5 coexpression data)

CoexMap"7484893"


ppoLOC7484893 | Entrez gene ID : 7484893    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 4 3 2 2 2 3 3 3 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0010417 [list] [network] glucuronoxylan biosynthetic process  (11 genes)  IEA  
GO:0009834 [list] [network] plant-type secondary cell wall biogenesis  (22 genes)  IEA  
GO CC
GO MF
GO:0047517 [list] [network] 1,4-beta-D-xylan synthase activity  (3 genes)  IEA  
GO:0080116 [list] [network] glucuronoxylan glucuronosyltransferase activity  (3 genes)  IEA  
Protein XP_002318783.3 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  E.R. 3,  chlo 1,  nucl 1,  mito 1,  pero 1,  chlo_mito 1  (predict for XP_002318783.3)
Subcellular
localization
TargetP
scret 8  (predict for XP_002318783.3)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7484893

.
ppo-r.4
for
7484893

.
ppo-u.5
for
7491436

.
ppo-u.5
for
7496525

.
gma-u.5
for
100800085

.
gma-u.5
for
100812747

.
gma-u.5
for
100797122

.
mtr-u.5
for
25501977

.
mtr-u.5
for
25501976

.
ath-u.5
for
GUT1

.
ath-u.5
for
GUT2

.
vvi-u.5
for
100852698

.
vvi-u.5
for
100242415

.
sly-u.5
for
101250897

.
sly-u.5
for
101252560

.
sly-u.5
for
101253484

.
osa-u.5
for
9269523

.
osa-u.5
for
4335711

.
osa-u.5
for
4327240

.
zma-u.5
for
100281324

.
zma-u.5
for
100282889

.
zma-u.5
for
100191546

.


Ortholog ID: 1026
Species ath ath gma gma sly sly osa osa zma zma bra bra vvi vvi ppo mtr mtr tae tae hvu hvu ghi ghi bna bna sbi sbi sot sot cit cit bdi bdi nta nta
Symbol GUT1 GUT2 LOC100800085 LOC100797122 LOC101250897 LOC101253484 LOC9269523 LOC4348204 LOC100282889 LOC100384778 LOC103835395 LOC103829057 LOC100852698 LOC100242415 LOC7496525 LOC25501976 LOC25501977 LOC100682498 LOC123072084 LOC123426591 LOC123445303 LOC107946622 LOC107896962 LOC106425347 LOC106358025 LOC8072543 LOC8072039 LOC102589001 LOC102580860 LOC102621033 LOC102621903 LOC100835653 LOC100843114 LOC107830158 LOC107804304
Function* Exostosin family protein Exostosin family protein probable beta-1,4-xylosyltransferase IRX10L probable beta-1,4-xylosyltransferase IRX10L probable beta-1,4-xylosyltransferase IRX10L probable beta-1,4-xylosyltransferase IRX10L probable glucuronosyltransferase Os02g0520750 probable glucuronosyltransferase GUT1 uncharacterized LOC100282889 putative beta-14-xylosyltransferase IRX10L probable beta-1,4-xylosyltransferase IRX10 probable beta-1,4-xylosyltransferase IRX10 probable beta-1,4-xylosyltransferase IRX10L probable beta-1,4-xylosyltransferase IRX10L probable beta-1,4-xylosyltransferase IRX10 probable beta-1,4-xylosyltransferase IRX10L probable beta-1,4-xylosyltransferase IRX10L probable glucuronosyltransferase Os01g0926600 probable glucuronosyltransferase Os01g0926400 probable glucuronosyltransferase Os04g0398600 probable glucuronosyltransferase Os01g0926400 probable beta-1,4-xylosyltransferase IRX10L probable beta-1,4-xylosyltransferase IRX10 probable beta-1,4-xylosyltransferase IRX10 probable beta-1,4-xylosyltransferase IRX10 probable glucuronosyltransferase Os01g0926700 probable glucuronosyltransferase Os04g0398600 probable beta-1,4-xylosyltransferase IRX10L probable beta-1,4-xylosyltransferase IRX10L probable beta-1,4-xylosyltransferase IRX10L probable beta-1,4-xylosyltransferase IRX10 probable glucuronosyltransferase Os02g0520750 probable glucuronosyltransferase Os04g0398600 putative beta-1,4-xylosyltransferase IRX10L putative beta-1,4-xylosyltransferase IRX10L
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00330 Arginine and proline metabolism 3
ath00514 Other types of O-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04141 Protein processing in endoplasmic reticulum 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00940 Phenylpropanoid biosynthesis 8
osa00360 Phenylalanine metabolism 3
osa01230 Biosynthesis of amino acids 3
osa00270 Cysteine and methionine metabolism 2
osa00670 One carbon pool by folate 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 6
zma04141 Protein processing in endoplasmic reticulum 2
zma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00940 Phenylpropanoid biosynthesis 3
zma01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00520 Amino sugar and nucleotide sugar metabolism 2
bra01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00270 Cysteine and methionine metabolism 3
vvi01230 Biosynthesis of amino acids 3
vvi00450 Selenocompound metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04141 Protein processing in endoplasmic reticulum 3
hvu04145 Phagosome 3
hvu04120 Ubiquitin mediated proteolysis 2
hvu00190 Oxidative phosphorylation 2
hvu04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00941 Flavonoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00514 Other types of O-glycan biosynthesis 2
ghi00510 N-Glycan biosynthesis 2
ghi00513 Various types of N-glycan biosynthesis 2
ghi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00940 Phenylpropanoid biosynthesis 5
sbi00360 Phenylalanine metabolism 4
sbi00941 Flavonoid biosynthesis 2
sbi00944 Flavone and flavonol biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03050 Proteasome 3
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00940 Phenylpropanoid biosynthesis 9
sot00941 Flavonoid biosynthesis 6
sot00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 6
sot00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00520 Amino sugar and nucleotide sugar metabolism 2
cit00514 Other types of O-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 836306 839635 100800085 100797122 101250897 101253484 9269523 4348204 100282889 100384778 103835395 103829057 100852698 100242415 7496525 25501976 25501977 100682498 123072084 123426591 123445303 107946622 107896962 106425347 106358025 8072543 8072039 102589001 102580860 102621033 102621903 100835653 100843114 107830158 107804304
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